Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 PA2G4P1-201ENST00000442248 1197 ntBASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 AL358876.1-201ENST00000453364 1075 ntBASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 SEPT7P3-201ENST00000455017 621 ntBASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 AL591473.1-201ENST00000464297 313 ntBASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 RPS17P15-201ENST00000475609 349 ntBASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 ZSWIM7-209ENST00000486655 726 ntTSL 3 BASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 RPL32P33-201ENST00000487023 394 ntBASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 RPS27P20-201ENST00000492051 246 ntBASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 AC090638.1-201ENST00000498296 909 ntBASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 AC113367.2-201ENST00000505749 160 ntBASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 AC138938.1-201ENST00000515431 782 ntBASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 SCARNA18.1-201ENST00000516330 83 ntBASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 WBP1LP3-201ENST00000523033 208 ntBASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 IGLV3-30-201ENST00000524362 298 ntBASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 AC130364.2-201ENST00000528639 604 ntBASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 AC090022.1-201ENST00000546569 311 ntBASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 AC006349.1-201ENST00000555526 235 ntBASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 PRPF19P1-201ENST00000584766 898 ntBASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 WBP1LP11-201ENST00000586141 328 ntBASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 AC108738.1-201ENST00000603703 237 ntBASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 AL122125.1-201ENST00000616999 600 ntBASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 AC022919.1-201ENST00000624979 626 ntBASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 AC114947.2-201ENST00000565748 2125 ntBASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 AL354854.1-201ENST00000455940 1363 ntBASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC28BQ9BUN5 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
CCDC28BQ9BUN5 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC28BQ9BUN5 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC28BQ9BUN5 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.38□□□□□ -1.55
CCDC28BQ9BUN5 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC28BQ9BUN5 SOCS5P3-201ENST00000425115 1576 ntBASIC5.38□□□□□ -1.55
CCDC28BQ9BUN5 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC28BQ9BUN5 AL360270.2-201ENST00000562952 5985 ntBASIC5.38□□□□□ -1.55
CCDC28BQ9BUN5 AL022393.1-201ENST00000625142 1677 ntBASIC5.38□□□□□ -1.55
CCDC28BQ9BUN5 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
CCDC28BQ9BUN5 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
CCDC28BQ9BUN5 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.38□□□□□ -1.55
CCDC28BQ9BUN5 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC28BQ9BUN5 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC28BQ9BUN5 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC28BQ9BUN5 MIR130B-202ENST00000385018 82 ntBASIC5.38□□□□□ -1.55
CCDC28BQ9BUN5 RNA5SP231-201ENST00000410496 138 ntBASIC5.38□□□□□ -1.55
CCDC28BQ9BUN5 RPS20P25-201ENST00000412447 352 ntBASIC5.38□□□□□ -1.55
CCDC28BQ9BUN5 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.38□□□□□ -1.55
CCDC28BQ9BUN5 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.38□□□□□ -1.55
CCDC28BQ9BUN5 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC28BQ9BUN5 KCTD9P1-201ENST00000430462 1167 ntBASIC5.38□□□□□ -1.55
CCDC28BQ9BUN5 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CCDC28BQ9BUN5 VN1R110P-201ENST00000438988 971 ntBASIC5.38□□□□□ -1.55
CCDC28BQ9BUN5 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.38□□□□□ -1.55
CCDC28BQ9BUN5 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
CCDC28BQ9BUN5 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.38□□□□□ -1.55
CCDC28BQ9BUN5 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.38□□□□□ -1.55
CCDC28BQ9BUN5 AP000942.1-201ENST00000463969 747 ntBASIC5.38□□□□□ -1.55
CCDC28BQ9BUN5 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.38□□□□□ -1.55
CCDC28BQ9BUN5 AC009120.1-201ENST00000493458 473 ntBASIC5.38□□□□□ -1.55
CCDC28BQ9BUN5 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.38□□□□□ -1.55
CCDC28BQ9BUN5 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC5.38□□□□□ -1.55
CCDC28BQ9BUN5 LDHAP1-201ENST00000509421 992 ntBASIC5.38□□□□□ -1.55
CCDC28BQ9BUN5 RNA5SP441-201ENST00000516809 88 ntBASIC5.38□□□□□ -1.55
CCDC28BQ9BUN5 SCARNA6.1-201ENST00000516989 238 ntBASIC5.38□□□□□ -1.55
CCDC28BQ9BUN5 CDC42P3-201ENST00000518493 633 ntBASIC5.38□□□□□ -1.55
CCDC28BQ9BUN5 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.38□□□□□ -1.55
CCDC28BQ9BUN5 PCNAP4-201ENST00000532690 730 ntBASIC5.38□□□□□ -1.55
CCDC28BQ9BUN5 HSPE1P2-201ENST00000554777 306 ntBASIC5.38□□□□□ -1.55
CCDC28BQ9BUN5 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.38□□□□□ -1.55
CCDC28BQ9BUN5 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.38□□□□□ -1.55
CCDC28BQ9BUN5 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.38□□□□□ -1.55
CCDC28BQ9BUN5 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.38□□□□□ -1.55
CCDC28BQ9BUN5 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC28BQ9BUN5 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC28BQ9BUN5 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC28BQ9BUN5 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC28BQ9BUN5 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC28BQ9BUN5 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CCDC28BQ9BUN5 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms