Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 MTCO1P11-201ENST00000429111 1528 ntBASIC5.53□□□□□ -1.52
ECHDC3Q96DC8 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.53□□□□□ -1.52
ECHDC3Q96DC8 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
ECHDC3Q96DC8 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
ECHDC3Q96DC8 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
ECHDC3Q96DC8 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.52□□□□□ -1.53
ECHDC3Q96DC8 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
ECHDC3Q96DC8 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
ECHDC3Q96DC8 RNA5SP183-201ENST00000362452 119 ntBASIC5.52□□□□□ -1.53
ECHDC3Q96DC8 RN7SKP162-201ENST00000363605 345 ntBASIC5.52□□□□□ -1.53
ECHDC3Q96DC8 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.52□□□□□ -1.53
ECHDC3Q96DC8 RPL7P56-201ENST00000429441 717 ntBASIC5.52□□□□□ -1.53
ECHDC3Q96DC8 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.52□□□□□ -1.53
ECHDC3Q96DC8 AC105399.1-202ENST00000447303 205 ntBASIC5.52□□□□□ -1.53
ECHDC3Q96DC8 IGBP1P3-201ENST00000447449 1000 ntBASIC5.52□□□□□ -1.53
ECHDC3Q96DC8 RN7SL51P-201ENST00000468230 285 ntBASIC5.52□□□□□ -1.53
ECHDC3Q96DC8 AC135999.1-201ENST00000478962 479 ntBASIC5.52□□□□□ -1.53
ECHDC3Q96DC8 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.52□□□□□ -1.53
ECHDC3Q96DC8 SUMO2P4-201ENST00000504193 276 ntBASIC5.52□□□□□ -1.53
ECHDC3Q96DC8 GLUD1P3-202ENST00000508551 200 ntBASIC5.52□□□□□ -1.53
ECHDC3Q96DC8 AC011411.1-201ENST00000509592 876 ntBASIC5.52□□□□□ -1.53
ECHDC3Q96DC8 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.52□□□□□ -1.53
ECHDC3Q96DC8 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.52□□□□□ -1.53
ECHDC3Q96DC8 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.52□□□□□ -1.53
ECHDC3Q96DC8 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.52□□□□□ -1.53
ECHDC3Q96DC8 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
ECHDC3Q96DC8 AC007225.2-201ENST00000562529 256 ntBASIC5.52□□□□□ -1.53
ECHDC3Q96DC8 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.52□□□□□ -1.53
ECHDC3Q96DC8 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.52□□□□□ -1.53
ECHDC3Q96DC8 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.52□□□□□ -1.53
ECHDC3Q96DC8 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.52□□□□□ -1.53
ECHDC3Q96DC8 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.52□□□□□ -1.53
ECHDC3Q96DC8 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.52□□□□□ -1.53
ECHDC3Q96DC8 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.52□□□□□ -1.53
ECHDC3Q96DC8 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.52□□□□□ -1.53
ECHDC3Q96DC8 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
ECHDC3Q96DC8 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
ECHDC3Q96DC8 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.52□□□□□ -1.53
ECHDC3Q96DC8 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
ECHDC3Q96DC8 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.51□□□□□ -1.53
ECHDC3Q96DC8 AC138907.8-201ENST00000623981 2256 ntBASIC5.51□□□□□ -1.53
ECHDC3Q96DC8 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.51□□□□□ -1.53
ECHDC3Q96DC8 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
ECHDC3Q96DC8 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.51□□□□□ -1.53
ECHDC3Q96DC8 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
ECHDC3Q96DC8 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
ECHDC3Q96DC8 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.51□□□□□ -1.53
ECHDC3Q96DC8 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
ECHDC3Q96DC8 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
ECHDC3Q96DC8 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
ECHDC3Q96DC8 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
ECHDC3Q96DC8 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
ECHDC3Q96DC8 SNORA16A-201ENST00000384342 137 ntBASIC5.51□□□□□ -1.53
ECHDC3Q96DC8 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
ECHDC3Q96DC8 AC009804.1-201ENST00000400949 179 ntBASIC5.51□□□□□ -1.53
ECHDC3Q96DC8 CYCSP12-201ENST00000437729 300 ntBASIC5.51□□□□□ -1.53
ECHDC3Q96DC8 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.51□□□□□ -1.53
ECHDC3Q96DC8 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.51□□□□□ -1.53
ECHDC3Q96DC8 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.51□□□□□ -1.53
ECHDC3Q96DC8 AL035090.1-201ENST00000454835 332 ntBASIC5.51□□□□□ -1.53
ECHDC3Q96DC8 RPL7P45-201ENST00000455851 743 ntBASIC5.51□□□□□ -1.53
ECHDC3Q96DC8 AL133445.1-201ENST00000467051 452 ntBASIC5.51□□□□□ -1.53
ECHDC3Q96DC8 SIAH1P1-201ENST00000479411 923 ntBASIC5.51□□□□□ -1.53
ECHDC3Q96DC8 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.51□□□□□ -1.53
ECHDC3Q96DC8 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.51□□□□□ -1.53
ECHDC3Q96DC8 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.51□□□□□ -1.53
ECHDC3Q96DC8 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.51□□□□□ -1.53
ECHDC3Q96DC8 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
ECHDC3Q96DC8 BLZF2P-201ENST00000553776 1130 ntBASIC5.51□□□□□ -1.53
ECHDC3Q96DC8 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.51□□□□□ -1.53
ECHDC3Q96DC8 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.51□□□□□ -1.53
ECHDC3Q96DC8 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.51□□□□□ -1.53
ECHDC3Q96DC8 AC025857.2-201ENST00000602711 238 ntBASIC5.51□□□□□ -1.53
ECHDC3Q96DC8 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.51□□□□□ -1.53
ECHDC3Q96DC8 IMMP1LP3-201ENST00000604197 224 ntBASIC5.51□□□□□ -1.53
ECHDC3Q96DC8 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.51□□□□□ -1.53
ECHDC3Q96DC8 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.51□□□□□ -1.53
ECHDC3Q96DC8 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.51□□□□□ -1.53
ECHDC3Q96DC8 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.51□□□□□ -1.53
ECHDC3Q96DC8 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
ECHDC3Q96DC8 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
ECHDC3Q96DC8 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.51□□□□□ -1.53
ECHDC3Q96DC8 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
ECHDC3Q96DC8 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
ECHDC3Q96DC8 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.51□□□□□ -1.53
ECHDC3Q96DC8 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.51□□□□□ -1.53
ECHDC3Q96DC8 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
ECHDC3Q96DC8 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ECHDC3Q96DC8 AC004076.2-201ENST00000620532 3323 ntBASIC5.5□□□□□ -1.53
ECHDC3Q96DC8 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ECHDC3Q96DC8 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
ECHDC3Q96DC8 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.5□□□□□ -1.53
ECHDC3Q96DC8 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ECHDC3Q96DC8 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
ECHDC3Q96DC8 AL355834.1-201ENST00000556602 3965 ntBASIC5.5□□□□□ -1.53
ECHDC3Q96DC8 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ECHDC3Q96DC8 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.5□□□□□ -1.53
ECHDC3Q96DC8 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ECHDC3Q96DC8 MIR133B-201ENST00000362210 119 ntBASIC5.5□□□□□ -1.53
ECHDC3Q96DC8 RNA5SP335-201ENST00000363817 110 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms