Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AC007346.1-201ENST00000569208 867 ntBASIC5.08□□□□□ -1.6
RFT1Q96AA3 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RFT1Q96AA3 CCDC58P1-201ENST00000578567 430 ntBASIC5.08□□□□□ -1.6
RFT1Q96AA3 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.08□□□□□ -1.6
RFT1Q96AA3 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.08□□□□□ -1.6
RFT1Q96AA3 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RFT1Q96AA3 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.08□□□□□ -1.6
RFT1Q96AA3 FAM72A-208ENST00000607379 1139 ntBASIC5.08□□□□□ -1.6
RFT1Q96AA3 AC012467.1-201ENST00000607740 256 ntBASIC5.08□□□□□ -1.6
RFT1Q96AA3 AL080312.2-201ENST00000613001 630 ntBASIC5.08□□□□□ -1.6
RFT1Q96AA3 AL021918.2-201ENST00000613415 194 ntBASIC5.08□□□□□ -1.6
RFT1Q96AA3 AC073575.2-201ENST00000614212 627 ntBASIC5.08□□□□□ -1.6
RFT1Q96AA3 AC005899.6-201ENST00000620729 297 ntBASIC5.08□□□□□ -1.6
RFT1Q96AA3 AL138693.1-201ENST00000622219 129 ntBASIC5.08□□□□□ -1.6
RFT1Q96AA3 AC021766.1-201ENST00000624404 741 ntBASIC5.08□□□□□ -1.6
RFT1Q96AA3 AC073488.6-201ENST00000632293 754 ntBASIC5.08□□□□□ -1.6
RFT1Q96AA3 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC5.08□□□□□ -1.6
RFT1Q96AA3 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RFT1Q96AA3 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
RFT1Q96AA3 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
RFT1Q96AA3 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RFT1Q96AA3 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RFT1Q96AA3 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.07□□□□□ -1.6
RFT1Q96AA3 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RFT1Q96AA3 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.07□□□□□ -1.6
RFT1Q96AA3 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RFT1Q96AA3 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RFT1Q96AA3 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
RFT1Q96AA3 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RFT1Q96AA3 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
RFT1Q96AA3 AP004607.3-201ENST00000530354 3915 ntBASIC5.07□□□□□ -1.6
RFT1Q96AA3 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
RFT1Q96AA3 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RFT1Q96AA3 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RFT1Q96AA3 RNU6-152P-201ENST00000384037 107 ntBASIC5.07□□□□□ -1.6
RFT1Q96AA3 RNU1-136P-201ENST00000384181 164 ntBASIC5.07□□□□□ -1.6
RFT1Q96AA3 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.07□□□□□ -1.6
RFT1Q96AA3 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.07□□□□□ -1.6
RFT1Q96AA3 HYALP1-201ENST00000417674 1279 ntBASIC5.07□□□□□ -1.6
RFT1Q96AA3 AC092865.3-201ENST00000425390 1026 ntBASIC5.07□□□□□ -1.6
RFT1Q96AA3 AC130360.1-201ENST00000425489 1117 ntBASIC5.07□□□□□ -1.6
RFT1Q96AA3 AL445528.1-201ENST00000426330 420 ntBASIC5.07□□□□□ -1.6
RFT1Q96AA3 AC099677.3-201ENST00000427081 395 ntBASIC5.07□□□□□ -1.6
RFT1Q96AA3 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.07□□□□□ -1.6
RFT1Q96AA3 AC023141.3-201ENST00000436698 278 ntBASIC5.07□□□□□ -1.6
RFT1Q96AA3 AC114878.1-201ENST00000441166 358 ntBASIC5.07□□□□□ -1.6
RFT1Q96AA3 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.07□□□□□ -1.6
RFT1Q96AA3 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.07□□□□□ -1.6
RFT1Q96AA3 AC010240.2-201ENST00000445363 1205 ntBASIC5.07□□□□□ -1.6
RFT1Q96AA3 MORF4L1P4-201ENST00000450245 976 ntBASIC5.07□□□□□ -1.6
RFT1Q96AA3 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.07□□□□□ -1.6
RFT1Q96AA3 OR7E22P-201ENST00000478335 1035 ntBASIC5.07□□□□□ -1.6
RFT1Q96AA3 RPS27P20-201ENST00000492051 246 ntBASIC5.07□□□□□ -1.6
RFT1Q96AA3 SNRPCP11-201ENST00000492453 205 ntBASIC5.07□□□□□ -1.6
RFT1Q96AA3 EIF3LP3-201ENST00000495197 822 ntBASIC5.07□□□□□ -1.6
RFT1Q96AA3 PSMA2P2-201ENST00000504319 686 ntBASIC5.07□□□□□ -1.6
RFT1Q96AA3 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.07□□□□□ -1.6
RFT1Q96AA3 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RFT1Q96AA3 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
RFT1Q96AA3 MAST4-IT1-201ENST00000514241 658 ntBASIC5.07□□□□□ -1.6
RFT1Q96AA3 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.07□□□□□ -1.6
RFT1Q96AA3 MIR2117-201ENST00000516780 80 ntBASIC5.07□□□□□ -1.6
RFT1Q96AA3 AC130365.2-201ENST00000525882 1201 ntBASIC5.07□□□□□ -1.6
RFT1Q96AA3 EIF4A2P3-201ENST00000525903 1055 ntBASIC5.07□□□□□ -1.6
RFT1Q96AA3 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.07□□□□□ -1.6
RFT1Q96AA3 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.07□□□□□ -1.6
RFT1Q96AA3 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC5.07□□□□□ -1.6
RFT1Q96AA3 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.07□□□□□ -1.6
RFT1Q96AA3 GARSP1-201ENST00000570895 719 ntBASIC5.07□□□□□ -1.6
RFT1Q96AA3 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.07□□□□□ -1.6
RFT1Q96AA3 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC5.07□□□□□ -1.6
RFT1Q96AA3 AC239803.2-201ENST00000610161 430 ntBASIC5.07□□□□□ -1.6
RFT1Q96AA3 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RFT1Q96AA3 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RFT1Q96AA3 AC015722.2-201ENST00000622210 551 ntBASIC5.07□□□□□ -1.6
RFT1Q96AA3 AL357562.1-201ENST00000624911 609 ntBASIC5.07□□□□□ -1.6
RFT1Q96AA3 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.07□□□□□ -1.6
RFT1Q96AA3 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.07□□□□□ -1.6
RFT1Q96AA3 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.07□□□□□ -1.6
RFT1Q96AA3 AC119674.1-220ENST00000641502 1048 ntBASIC5.07□□□□□ -1.6
RFT1Q96AA3 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.07□□□□□ -1.6
RFT1Q96AA3 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RFT1Q96AA3 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.07□□□□□ -1.6
RFT1Q96AA3 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RFT1Q96AA3 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RFT1Q96AA3 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
RFT1Q96AA3 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RFT1Q96AA3 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RFT1Q96AA3 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
RFT1Q96AA3 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RFT1Q96AA3 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RFT1Q96AA3 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
RFT1Q96AA3 RBMY1HP-201ENST00000382759 1389 ntBASIC5.06□□□□□ -1.6
RFT1Q96AA3 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.06□□□□□ -1.6
RFT1Q96AA3 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
RFT1Q96AA3 RN7SKP74-201ENST00000362849 309 ntBASIC5.06□□□□□ -1.6
RFT1Q96AA3 MIR551B-201ENST00000384984 96 ntBASIC5.06□□□□□ -1.6
RFT1Q96AA3 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
RFT1Q96AA3 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RFT1Q96AA3 ST13P16-201ENST00000401760 781 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms