Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 RPS28P8-201ENST00000435020 208 ntBASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 AC009961.2-201ENST00000435771 251 ntBASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 OR7E102P-201ENST00000448855 1015 ntBASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 DNAJC9-AS1-203ENST00000457758 548 ntTSL 3 BASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 AC097493.1-201ENST00000463958 372 ntBASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 RPL21P71-201ENST00000465598 459 ntBASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 RPL23AP71-201ENST00000470966 469 ntBASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 RPS3AP14-201ENST00000483907 780 ntBASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 AC091544.1-201ENST00000484702 348 ntBASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 EIF3LP3-201ENST00000495197 822 ntBASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 HMGN1P12-201ENST00000499125 195 ntBASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 PGAM4P2-201ENST00000512491 721 ntBASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 LINC02021-203ENST00000514145 569 ntTSL 4 BASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 NACA2-201ENST00000521764 777 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 AC087521.3-201ENST00000528226 553 ntTSL 4 BASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 LINC01499-201ENST00000528720 553 ntTSL 4 BASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 LYZ-202ENST00000548839 558 ntTSL 2 BASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 AL390334.1-201ENST00000556395 450 ntBASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 AC013457.1-201ENST00000556770 1011 ntTSL 3 BASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 AC090971.3-201ENST00000557871 1041 ntBASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 AC007861.1-201ENST00000576671 674 ntTSL 5 BASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 AC025198.1-201ENST00000578331 419 ntBASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 LINC01255-203ENST00000587189 591 ntTSL 4 BASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 RIT2-202ENST00000589109 1156 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 ZNF85-206ENST00000596476 1259 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 AC104785.1-201ENST00000603220 588 ntBASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 AC116165.3-201ENST00000614524 400 ntBASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 FAM74A6-203ENST00000615956 481 ntBASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 Metazoa_SRP.192-201ENST00000616260 286 ntBASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 AC025162.2-201ENST00000619602 560 ntBASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 AC018558.4-201ENST00000622153 281 ntBASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 AC073488.2-201ENST00000631903 751 ntBASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 LINC01002-216ENST00000632351 572 ntTSL 5 BASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 AC108724.2-201ENST00000634593 290 ntBASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 AC006378.2-201ENST00000623178 2476 ntBASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 AL034417.4-202ENST00000642135 2236 ntBASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 OR9M1P-202ENST00000641564 3163 ntBASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 LINC00598-208ENST00000617777 2551 ntTSL 2 BASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 AP000766.1-201ENST00000561746 4140 ntBASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 CARD8-217ENST00000520753 3041 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 MEF2C-221ENST00000514015 2772 ntTSL 5 BASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 AL356361.1-201ENST00000400943 1459 ntBASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 NPIPB5-207ENST00000451409 3660 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 AC025125.1-201ENST00000624743 1922 ntBASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 PIWIL4-201ENST00000299001 3199 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 STMND1-203ENST00000536551 1322 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 KCNK2-203ENST00000444842 3379 ntAPPRIS ALT1 TSL 1 (best) BASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 AC093225.1-201ENST00000506867 1408 ntBASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 AC106712.1-201ENST00000483840 1888 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 AC005614.1-201ENST00000598952 3653 ntBASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 KIDINS220-202ENST00000319688 3765 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 TRIM42-201ENST00000286349 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 ARHGAP24-202ENST00000395183 2740 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 AL512646.1-201ENST00000269395 1077 ntBASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 OR4A15-201ENST00000314706 1035 ntBASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 OR2G2-201ENST00000320065 954 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 AHCYP5-201ENST00000331585 1238 ntBASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 RNA5SP71-201ENST00000362967 126 ntBASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 RNU6-877P-201ENST00000383868 107 ntBASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 RNU6-533P-201ENST00000384144 107 ntBASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 MIR595-201ENST00000384905 96 ntBASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 VN2R17P-201ENST00000391712 832 ntBASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 MORF4L1P1-201ENST00000404582 967 ntBASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 LINC01644-201ENST00000405369 984 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 AL390316.1-201ENST00000406279 553 ntBASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 AL034372.1-201ENST00000407586 754 ntBASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 Y_RNA.608-201ENST00000410647 95 ntBASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 RBMY2KP-201ENST00000418221 992 ntBASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 AL354732.1-204ENST00000421020 755 ntTSL 3 BASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 LINC00851-201ENST00000423033 727 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 DAZAP2-202ENST00000425012 1117 ntTSL 2 BASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 PRUNEP1-201ENST00000425846 705 ntBASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms