Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SYNE4Q8N205 AL137918.1-201ENST00000624542 1922 ntBASIC7.04□□□□□ -1.28
SYNE4Q8N205 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC7.04□□□□□ -1.28
SYNE4Q8N205 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SYNE4Q8N205 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
SYNE4Q8N205 U3.2-201ENST00000362981 210 ntBASIC7.04□□□□□ -1.28
SYNE4Q8N205 MIR765-201ENST00000390226 114 ntBASIC7.04□□□□□ -1.28
SYNE4Q8N205 ATP5F1P6-201ENST00000402768 767 ntBASIC7.04□□□□□ -1.28
SYNE4Q8N205 RNU6ATAC18P-201ENST00000408413 101 ntBASIC7.04□□□□□ -1.28
SYNE4Q8N205 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC7.04□□□□□ -1.28
SYNE4Q8N205 AC005033.1-201ENST00000428904 813 ntBASIC7.04□□□□□ -1.28
SYNE4Q8N205 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC7.04□□□□□ -1.28
SYNE4Q8N205 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC7.04□□□□□ -1.28
SYNE4Q8N205 CYCSP6-201ENST00000434498 302 ntBASIC7.04□□□□□ -1.28
SYNE4Q8N205 OR52B5P-201ENST00000435337 951 ntBASIC7.04□□□□□ -1.28
SYNE4Q8N205 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC7.04□□□□□ -1.28
SYNE4Q8N205 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC7.04□□□□□ -1.28
SYNE4Q8N205 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC7.04□□□□□ -1.28
SYNE4Q8N205 OFD1P3Y-201ENST00000453312 783 ntBASIC7.04□□□□□ -1.28
SYNE4Q8N205 LDHC-203ENST00000535809 757 ntTSL 5 BASIC7.04□□□□□ -1.28
SYNE4Q8N205 LDHC-205ENST00000537486 583 ntTSL 5 BASIC7.04□□□□□ -1.28
SYNE4Q8N205 CR383656.14-201ENST00000551951 406 ntBASIC7.04□□□□□ -1.28
SYNE4Q8N205 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC7.04□□□□□ -1.28
SYNE4Q8N205 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SYNE4Q8N205 MIR4301-201ENST00000577203 66 ntBASIC7.04□□□□□ -1.28
SYNE4Q8N205 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC7.04□□□□□ -1.28
SYNE4Q8N205 AC138473.1-201ENST00000605717 526 ntBASIC7.04□□□□□ -1.28
SYNE4Q8N205 AC006946.3-201ENST00000609791 756 ntBASIC7.04□□□□□ -1.28
SYNE4Q8N205 MIR6820-201ENST00000611508 62 ntBASIC7.04□□□□□ -1.28
SYNE4Q8N205 AC091046.2-201ENST00000620775 665 ntBASIC7.04□□□□□ -1.28
SYNE4Q8N205 AC073342.3-201ENST00000624211 193 ntBASIC7.04□□□□□ -1.28
SYNE4Q8N205 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SYNE4Q8N205 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC7.04□□□□□ -1.28
SYNE4Q8N205 OR52B5P-202ENST00000641118 1110 ntBASIC7.04□□□□□ -1.28
SYNE4Q8N205 SAMMSON-209ENST00000641222 1100 ntBASIC7.04□□□□□ -1.28
SYNE4Q8N205 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SYNE4Q8N205 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
SYNE4Q8N205 OFD1P17-201ENST00000437639 3018 ntBASIC7.04□□□□□ -1.28
SYNE4Q8N205 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SYNE4Q8N205 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
SYNE4Q8N205 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SYNE4Q8N205 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SYNE4Q8N205 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC7.04□□□□□ -1.28
SYNE4Q8N205 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SYNE4Q8N205 AL589993.1-201ENST00000407450 2524 ntBASIC7.03□□□□□ -1.28
SYNE4Q8N205 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC7.03□□□□□ -1.28
SYNE4Q8N205 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC7.03□□□□□ -1.28
SYNE4Q8N205 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SYNE4Q8N205 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SYNE4Q8N205 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
SYNE4Q8N205 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC7.03□□□□□ -1.28
SYNE4Q8N205 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
SYNE4Q8N205 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SYNE4Q8N205 RPL23P2-201ENST00000320371 421 ntBASIC7.03□□□□□ -1.28
SYNE4Q8N205 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC7.03□□□□□ -1.28
SYNE4Q8N205 AL772161.1-201ENST00000439130 476 ntBASIC7.03□□□□□ -1.28
SYNE4Q8N205 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC7.03□□□□□ -1.28
SYNE4Q8N205 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC7.03□□□□□ -1.28
SYNE4Q8N205 OSTCP1-201ENST00000455507 450 ntBASIC7.03□□□□□ -1.28
SYNE4Q8N205 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC7.03□□□□□ -1.28
SYNE4Q8N205 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC7.03□□□□□ -1.28
SYNE4Q8N205 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC7.03□□□□□ -1.28
SYNE4Q8N205 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC7.03□□□□□ -1.28
SYNE4Q8N205 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC7.03□□□□□ -1.28
SYNE4Q8N205 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC7.03□□□□□ -1.28
SYNE4Q8N205 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
SYNE4Q8N205 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC7.03□□□□□ -1.28
SYNE4Q8N205 AC012616.1-201ENST00000600294 197 ntBASIC7.03□□□□□ -1.28
SYNE4Q8N205 ZNF92P2-201ENST00000600543 1059 ntBASIC7.03□□□□□ -1.28
SYNE4Q8N205 AC133644.2-201ENST00000608142 540 ntBASIC7.03□□□□□ -1.28
SYNE4Q8N205 AC090607.5-201ENST00000615692 224 ntBASIC7.03□□□□□ -1.28
SYNE4Q8N205 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC7.03□□□□□ -1.28
SYNE4Q8N205 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC7.03□□□□□ -1.28
SYNE4Q8N205 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
SYNE4Q8N205 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
SYNE4Q8N205 TEK-202ENST00000406359 3935 ntTSL 2 BASIC7.03□□□□□ -1.28
SYNE4Q8N205 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC7.03□□□□□ -1.28
SYNE4Q8N205 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
SYNE4Q8N205 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SYNE4Q8N205 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC7.03□□□□□ -1.28
SYNE4Q8N205 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC7.03□□□□□ -1.28
SYNE4Q8N205 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SYNE4Q8N205 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC7.03□□□□□ -1.28
SYNE4Q8N205 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC7.03□□□□□ -1.28
SYNE4Q8N205 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SYNE4Q8N205 AL136520.1-201ENST00000600311 1322 ntBASIC7.02□□□□□ -1.28
SYNE4Q8N205 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
SYNE4Q8N205 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
SYNE4Q8N205 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SYNE4Q8N205 AC068870.1-201ENST00000563737 2455 ntBASIC7.02□□□□□ -1.29
SYNE4Q8N205 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SYNE4Q8N205 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC7.02□□□□□ -1.29
SYNE4Q8N205 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SYNE4Q8N205 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC7.02□□□□□ -1.29
SYNE4Q8N205 RNU4-2-201ENST00000365668 141 ntBASIC7.02□□□□□ -1.29
SYNE4Q8N205 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
SYNE4Q8N205 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SYNE4Q8N205 METTL15P3-201ENST00000415522 1221 ntBASIC7.02□□□□□ -1.29
SYNE4Q8N205 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC7.02□□□□□ -1.29
SYNE4Q8N205 AK3P5-201ENST00000432033 519 ntBASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms