Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.11□□□□□ -1.59
C9orf40Q8IXQ3 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.11□□□□□ -1.59
C9orf40Q8IXQ3 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.11□□□□□ -1.59
C9orf40Q8IXQ3 AZGP1P2-201ENST00000454506 345 ntBASIC5.11□□□□□ -1.59
C9orf40Q8IXQ3 EIF1P7-201ENST00000487533 337 ntBASIC5.11□□□□□ -1.59
C9orf40Q8IXQ3 RN7SL184P-201ENST00000488308 297 ntBASIC5.11□□□□□ -1.59
C9orf40Q8IXQ3 RN7SL547P-201ENST00000490793 290 ntBASIC5.11□□□□□ -1.59
C9orf40Q8IXQ3 AC090638.1-201ENST00000498296 909 ntBASIC5.11□□□□□ -1.59
C9orf40Q8IXQ3 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.11□□□□□ -1.59
C9orf40Q8IXQ3 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.11□□□□□ -1.59
C9orf40Q8IXQ3 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.11□□□□□ -1.59
C9orf40Q8IXQ3 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.11□□□□□ -1.59
C9orf40Q8IXQ3 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.11□□□□□ -1.59
C9orf40Q8IXQ3 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.11□□□□□ -1.59
C9orf40Q8IXQ3 AC009962.1-201ENST00000567327 3813 ntBASIC5.11□□□□□ -1.59
C9orf40Q8IXQ3 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.11□□□□□ -1.59
C9orf40Q8IXQ3 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.11□□□□□ -1.59
C9orf40Q8IXQ3 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
C9orf40Q8IXQ3 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.11□□□□□ -1.59
C9orf40Q8IXQ3 LSM1P2-201ENST00000604911 322 ntBASIC5.11□□□□□ -1.59
C9orf40Q8IXQ3 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.11□□□□□ -1.59
C9orf40Q8IXQ3 AC007204.2-201ENST00000615022 616 ntBASIC5.11□□□□□ -1.59
C9orf40Q8IXQ3 AC022960.2-201ENST00000616300 666 ntBASIC5.11□□□□□ -1.59
C9orf40Q8IXQ3 MIR8080-201ENST00000622224 89 ntBASIC5.11□□□□□ -1.59
C9orf40Q8IXQ3 AL355480.1-201ENST00000629041 99 ntBASIC5.11□□□□□ -1.59
C9orf40Q8IXQ3 AC079776.5-201ENST00000641920 211 ntBASIC5.11□□□□□ -1.59
C9orf40Q8IXQ3 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.11□□□□□ -1.59
C9orf40Q8IXQ3 CASC19-248ENST00000641674 1356 ntBASIC5.11□□□□□ -1.59
C9orf40Q8IXQ3 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.11□□□□□ -1.59
C9orf40Q8IXQ3 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.11□□□□□ -1.59
C9orf40Q8IXQ3 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
C9orf40Q8IXQ3 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
C9orf40Q8IXQ3 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
C9orf40Q8IXQ3 AC125336.1-201ENST00000508893 2827 ntBASIC5.1□□□□□ -1.59
C9orf40Q8IXQ3 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
C9orf40Q8IXQ3 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
C9orf40Q8IXQ3 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
C9orf40Q8IXQ3 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
C9orf40Q8IXQ3 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
C9orf40Q8IXQ3 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.1□□□□□ -1.59
C9orf40Q8IXQ3 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
C9orf40Q8IXQ3 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
C9orf40Q8IXQ3 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
C9orf40Q8IXQ3 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
C9orf40Q8IXQ3 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
C9orf40Q8IXQ3 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
C9orf40Q8IXQ3 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.1□□□□□ -1.59
C9orf40Q8IXQ3 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.1□□□□□ -1.59
C9orf40Q8IXQ3 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.1□□□□□ -1.59
C9orf40Q8IXQ3 RIMKLBP2-201ENST00000424737 654 ntBASIC5.1□□□□□ -1.59
C9orf40Q8IXQ3 RPL7P56-201ENST00000429441 717 ntBASIC5.1□□□□□ -1.59
C9orf40Q8IXQ3 LINC02210-201ENST00000444561 288 ntBASIC5.1□□□□□ -1.59
C9orf40Q8IXQ3 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.1□□□□□ -1.59
C9orf40Q8IXQ3 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.1□□□□□ -1.59
C9orf40Q8IXQ3 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.1□□□□□ -1.59
C9orf40Q8IXQ3 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.1□□□□□ -1.59
C9orf40Q8IXQ3 OR2AF1P-201ENST00000454899 889 ntBASIC5.1□□□□□ -1.59
C9orf40Q8IXQ3 RN7SL51P-201ENST00000468230 285 ntBASIC5.1□□□□□ -1.59
C9orf40Q8IXQ3 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
C9orf40Q8IXQ3 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
C9orf40Q8IXQ3 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.1□□□□□ -1.59
C9orf40Q8IXQ3 RN7SKP99-201ENST00000517028 307 ntBASIC5.1□□□□□ -1.59
C9orf40Q8IXQ3 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.1□□□□□ -1.59
C9orf40Q8IXQ3 AC078878.1-201ENST00000539832 958 ntBASIC5.1□□□□□ -1.59
C9orf40Q8IXQ3 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.1□□□□□ -1.59
C9orf40Q8IXQ3 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
C9orf40Q8IXQ3 AC019322.1-201ENST00000571869 389 ntBASIC5.1□□□□□ -1.59
C9orf40Q8IXQ3 AP005403.1-201ENST00000579720 229 ntBASIC5.1□□□□□ -1.59
C9orf40Q8IXQ3 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.1□□□□□ -1.59
C9orf40Q8IXQ3 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.1□□□□□ -1.59
C9orf40Q8IXQ3 SUGT1P3-202ENST00000604259 383 ntBASIC5.1□□□□□ -1.59
C9orf40Q8IXQ3 AL022394.1-201ENST00000606979 292 ntBASIC5.1□□□□□ -1.59
C9orf40Q8IXQ3 AC079395.2-201ENST00000610982 737 ntBASIC5.1□□□□□ -1.59
C9orf40Q8IXQ3 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.1□□□□□ -1.59
C9orf40Q8IXQ3 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.1□□□□□ -1.59
C9orf40Q8IXQ3 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.1□□□□□ -1.59
C9orf40Q8IXQ3 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
C9orf40Q8IXQ3 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
C9orf40Q8IXQ3 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
C9orf40Q8IXQ3 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
C9orf40Q8IXQ3 AC006206.1-201ENST00000544842 3387 ntBASIC5.1□□□□□ -1.59
C9orf40Q8IXQ3 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
C9orf40Q8IXQ3 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
C9orf40Q8IXQ3 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
C9orf40Q8IXQ3 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
C9orf40Q8IXQ3 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.09□□□□□ -1.59
C9orf40Q8IXQ3 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
C9orf40Q8IXQ3 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
C9orf40Q8IXQ3 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.09□□□□□ -1.59
C9orf40Q8IXQ3 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
C9orf40Q8IXQ3 RN7SKP160-201ENST00000363804 340 ntBASIC5.09□□□□□ -1.59
C9orf40Q8IXQ3 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
C9orf40Q8IXQ3 SNORA16A-201ENST00000384342 137 ntBASIC5.09□□□□□ -1.59
C9orf40Q8IXQ3 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.09□□□□□ -1.59
C9orf40Q8IXQ3 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
C9orf40Q8IXQ3 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC5.09□□□□□ -1.59
C9orf40Q8IXQ3 IGBP1P3-201ENST00000447449 1000 ntBASIC5.09□□□□□ -1.59
C9orf40Q8IXQ3 AC007386.1-201ENST00000455212 582 ntBASIC5.09□□□□□ -1.59
C9orf40Q8IXQ3 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.09□□□□□ -1.59
C9orf40Q8IXQ3 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms