Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.27□□□□□ -1.57
SHFQ7M4L6 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SHFQ7M4L6 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
SHFQ7M4L6 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SHFQ7M4L6 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
SHFQ7M4L6 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SHFQ7M4L6 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SHFQ7M4L6 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.27□□□□□ -1.57
SHFQ7M4L6 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
SHFQ7M4L6 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SHFQ7M4L6 MIR551B-201ENST00000384984 96 ntBASIC5.27□□□□□ -1.57
SHFQ7M4L6 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SHFQ7M4L6 GLUD1P9-201ENST00000420997 1173 ntBASIC5.27□□□□□ -1.57
SHFQ7M4L6 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC5.27□□□□□ -1.57
SHFQ7M4L6 AC099677.3-201ENST00000427081 395 ntBASIC5.27□□□□□ -1.57
SHFQ7M4L6 CRIP1P1-201ENST00000427567 185 ntBASIC5.27□□□□□ -1.57
SHFQ7M4L6 MTCYBP32-201ENST00000427945 1084 ntBASIC5.27□□□□□ -1.57
SHFQ7M4L6 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.27□□□□□ -1.57
SHFQ7M4L6 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC5.27□□□□□ -1.57
SHFQ7M4L6 AL512661.1-201ENST00000434586 1253 ntBASIC5.27□□□□□ -1.57
SHFQ7M4L6 RPS12P17-201ENST00000438591 377 ntBASIC5.27□□□□□ -1.57
SHFQ7M4L6 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SHFQ7M4L6 RPL5P25-201ENST00000441148 775 ntBASIC5.27□□□□□ -1.57
SHFQ7M4L6 PA2G4P1-201ENST00000442248 1197 ntBASIC5.27□□□□□ -1.57
SHFQ7M4L6 MOB1AP2-201ENST00000446060 614 ntBASIC5.27□□□□□ -1.57
SHFQ7M4L6 AC097359.1-201ENST00000447946 463 ntBASIC5.27□□□□□ -1.57
SHFQ7M4L6 MTND6P5-201ENST00000448266 512 ntBASIC5.27□□□□□ -1.57
SHFQ7M4L6 NPM1P19-201ENST00000450070 712 ntBASIC5.27□□□□□ -1.57
SHFQ7M4L6 AC004129.2-201ENST00000457229 287 ntBASIC5.27□□□□□ -1.57
SHFQ7M4L6 OR7E22P-201ENST00000478335 1035 ntBASIC5.27□□□□□ -1.57
SHFQ7M4L6 PDCL3P4-201ENST00000489621 720 ntBASIC5.27□□□□□ -1.57
SHFQ7M4L6 AP002453.1-201ENST00000492327 668 ntBASIC5.27□□□□□ -1.57
SHFQ7M4L6 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SHFQ7M4L6 AC138517.1-201ENST00000515724 568 ntBASIC5.27□□□□□ -1.57
SHFQ7M4L6 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.27□□□□□ -1.57
SHFQ7M4L6 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.27□□□□□ -1.57
SHFQ7M4L6 AL121594.2-201ENST00000541658 472 ntBASIC5.27□□□□□ -1.57
SHFQ7M4L6 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.27□□□□□ -1.57
SHFQ7M4L6 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.27□□□□□ -1.57
SHFQ7M4L6 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.27□□□□□ -1.57
SHFQ7M4L6 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC5.27□□□□□ -1.57
SHFQ7M4L6 ZNF322P1-201ENST00000568013 1209 ntBASIC5.27□□□□□ -1.57
SHFQ7M4L6 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.27□□□□□ -1.57
SHFQ7M4L6 AC016839.1-201ENST00000578162 867 ntBASIC5.27□□□□□ -1.57
SHFQ7M4L6 MIR4433B-201ENST00000581329 102 ntBASIC5.27□□□□□ -1.57
SHFQ7M4L6 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.27□□□□□ -1.57
SHFQ7M4L6 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.27□□□□□ -1.57
SHFQ7M4L6 MTCO3P22-201ENST00000603219 784 ntBASIC5.27□□□□□ -1.57
SHFQ7M4L6 NDUFB9P1-201ENST00000604683 510 ntBASIC5.27□□□□□ -1.57
SHFQ7M4L6 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.27□□□□□ -1.57
SHFQ7M4L6 AC005156.1-201ENST00000613371 573 ntBASIC5.27□□□□□ -1.57
SHFQ7M4L6 AL133370.2-201ENST00000619934 439 ntBASIC5.27□□□□□ -1.57
SHFQ7M4L6 AC096708.4-201ENST00000620563 552 ntBASIC5.27□□□□□ -1.57
SHFQ7M4L6 AC015722.2-201ENST00000622210 551 ntBASIC5.27□□□□□ -1.57
SHFQ7M4L6 AC068880.4-201ENST00000623082 495 ntBASIC5.27□□□□□ -1.57
SHFQ7M4L6 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
SHFQ7M4L6 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SHFQ7M4L6 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SHFQ7M4L6 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SHFQ7M4L6 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SHFQ7M4L6 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
SHFQ7M4L6 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SHFQ7M4L6 AP004607.3-201ENST00000530354 3915 ntBASIC5.27□□□□□ -1.57
SHFQ7M4L6 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.27□□□□□ -1.57
SHFQ7M4L6 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.26□□□□□ -1.57
SHFQ7M4L6 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SHFQ7M4L6 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
SHFQ7M4L6 FBXL21-201ENST00000297158 1305 ntBASIC5.26□□□□□ -1.57
SHFQ7M4L6 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.26□□□□□ -1.57
SHFQ7M4L6 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.26□□□□□ -1.57
SHFQ7M4L6 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
SHFQ7M4L6 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
SHFQ7M4L6 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
SHFQ7M4L6 RNU1-134P-201ENST00000362935 165 ntBASIC5.26□□□□□ -1.57
SHFQ7M4L6 RN7SKP78-201ENST00000364711 318 ntBASIC5.26□□□□□ -1.57
SHFQ7M4L6 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.26□□□□□ -1.57
SHFQ7M4L6 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SHFQ7M4L6 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.26□□□□□ -1.57
SHFQ7M4L6 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.26□□□□□ -1.57
SHFQ7M4L6 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC5.26□□□□□ -1.57
SHFQ7M4L6 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC5.26□□□□□ -1.57
SHFQ7M4L6 RPS27AP6-201ENST00000427962 448 ntBASIC5.26□□□□□ -1.57
SHFQ7M4L6 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC5.26□□□□□ -1.57
SHFQ7M4L6 AC138761.5-201ENST00000433967 325 ntBASIC5.26□□□□□ -1.57
SHFQ7M4L6 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.26□□□□□ -1.57
SHFQ7M4L6 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC5.26□□□□□ -1.57
SHFQ7M4L6 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SHFQ7M4L6 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.26□□□□□ -1.57
SHFQ7M4L6 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.26□□□□□ -1.57
SHFQ7M4L6 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.26□□□□□ -1.57
SHFQ7M4L6 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SHFQ7M4L6 RNU1-88P-201ENST00000459274 128 ntBASIC5.26□□□□□ -1.57
SHFQ7M4L6 AC004890.1-201ENST00000461005 181 ntBASIC5.26□□□□□ -1.57
SHFQ7M4L6 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.26□□□□□ -1.57
SHFQ7M4L6 AC006539.1-201ENST00000481419 501 ntBASIC5.26□□□□□ -1.57
SHFQ7M4L6 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.26□□□□□ -1.57
SHFQ7M4L6 RPEP1-201ENST00000504507 658 ntBASIC5.26□□□□□ -1.57
SHFQ7M4L6 NAMPTP2-201ENST00000505629 1115 ntBASIC5.26□□□□□ -1.57
SHFQ7M4L6 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.26□□□□□ -1.57
SHFQ7M4L6 AC108103.1-201ENST00000511286 446 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms