Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC025768.1-201ENST00000510057 267 ntBASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 AC097486.1-201ENST00000515331 210 ntBASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 IGLV3-24-201ENST00000517477 197 ntBASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 AC134349.2-201ENST00000535136 910 ntBASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 AGGF1P7-201ENST00000562369 913 ntBASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 DPPA2P4-201ENST00000563717 878 ntBASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 AC234775.3-201ENST00000564612 656 ntBASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 AC134669.1-201ENST00000581275 672 ntBASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 PPATP2-201ENST00000605635 508 ntBASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 AP000484.1-201ENST00000620067 1252 ntBASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 AC009039.2-201ENST00000624524 529 ntBASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 GTF2IP4-201ENST00000453092 2054 ntBASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 AC006206.1-201ENST00000544842 3387 ntBASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 AP002833.3-201ENST00000625075 2265 ntBASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 AC068870.1-201ENST00000563737 2455 ntBASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 NENFP1-201ENST00000419476 466 ntBASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 AL035660.1-201ENST00000422041 222 ntBASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 BX276092.6-201ENST00000430476 250 ntBASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 AC099670.2-201ENST00000435130 321 ntBASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 TPTE2P3-201ENST00000441562 1189 ntBASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 HLA-DPA3-207ENST00000454398 229 ntBASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 BX276092.8-201ENST00000455722 250 ntBASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 RPS17P5-201ENST00000498293 408 ntBASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 AC098862.1-201ENST00000504991 413 ntBASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 AC093815.1-201ENST00000508637 280 ntBASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 AC060775.1-201ENST00000518241 520 ntBASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 AC107958.1-201ENST00000556576 290 ntBASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 NPM1P5-201ENST00000557228 838 ntBASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 MIR4260-201ENST00000583107 67 ntBASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 ZNF92P2-201ENST00000600543 1059 ntBASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 AC063977.5-201ENST00000601044 974 ntBASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 AC005776.1-201ENST00000603164 290 ntBASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 AC097504.2-201ENST00000608088 454 ntBASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 AC006946.3-201ENST00000609791 756 ntBASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 AC136428.4-201ENST00000634254 1155 ntBASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 AC006453.5-201ENST00000636451 619 ntBASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 SAMM50P1-201ENST00000455403 1399 ntBASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 AC104964.3-201ENST00000606115 2860 ntBASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 HSPD1P7-201ENST00000447985 1686 ntBASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
ZNF549Q6P9A3 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.62□□□□□ -1.51
ZNF549Q6P9A3 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
ZNF549Q6P9A3 AC027279.1-201ENST00000568885 4284 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms