Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 SNORA40.2-201ENST00000390847 128 ntBASIC7.13□□□□□ -1.27
SOX4Q06945 RNU6-757P-201ENST00000410334 100 ntBASIC7.13□□□□□ -1.27
SOX4Q06945 RN7SKP221-201ENST00000410420 301 ntBASIC7.13□□□□□ -1.27
SOX4Q06945 AC007899.1-201ENST00000412776 775 ntBASIC7.13□□□□□ -1.27
SOX4Q06945 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC7.13□□□□□ -1.27
SOX4Q06945 CCDC58P2-201ENST00000417131 366 ntBASIC7.13□□□□□ -1.27
SOX4Q06945 IPPKP1-201ENST00000422501 768 ntBASIC7.13□□□□□ -1.27
SOX4Q06945 FGF12-202ENST00000430714 603 ntTSL 2 BASIC7.13□□□□□ -1.27
SOX4Q06945 RPSAP32-201ENST00000432681 526 ntBASIC7.13□□□□□ -1.27
SOX4Q06945 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC7.13□□□□□ -1.27
SOX4Q06945 GTF3AP5-201ENST00000442645 697 ntBASIC7.13□□□□□ -1.27
SOX4Q06945 CST12P-201ENST00000457644 362 ntBASIC7.13□□□□□ -1.27
SOX4Q06945 AC236972.4-201ENST00000458091 963 ntBASIC7.13□□□□□ -1.27
SOX4Q06945 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
SOX4Q06945 SETP11-201ENST00000473027 690 ntBASIC7.13□□□□□ -1.27
SOX4Q06945 PFN2-209ENST00000481275 560 ntTSL 4 BASIC7.13□□□□□ -1.27
SOX4Q06945 AC021006.1-201ENST00000489849 553 ntBASIC7.13□□□□□ -1.27
SOX4Q06945 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC7.13□□□□□ -1.27
SOX4Q06945 AC112198.1-201ENST00000505369 1220 ntBASIC7.13□□□□□ -1.27
SOX4Q06945 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC7.13□□□□□ -1.27
SOX4Q06945 APOBEC3AP1-201ENST00000511396 287 ntBASIC7.13□□□□□ -1.27
SOX4Q06945 RNU6-405P-201ENST00000516637 110 ntBASIC7.13□□□□□ -1.27
SOX4Q06945 MTCYBP19-201ENST00000517463 1124 ntBASIC7.13□□□□□ -1.27
SOX4Q06945 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC7.13□□□□□ -1.27
SOX4Q06945 BCAS2P1-201ENST00000528022 632 ntBASIC7.13□□□□□ -1.27
SOX4Q06945 OR52K3P-201ENST00000531655 943 ntBASIC7.13□□□□□ -1.27
SOX4Q06945 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC7.13□□□□□ -1.27
SOX4Q06945 UBE2NP1-201ENST00000545592 458 ntBASIC7.13□□□□□ -1.27
SOX4Q06945 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
SOX4Q06945 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC7.13□□□□□ -1.27
SOX4Q06945 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC7.13□□□□□ -1.27
SOX4Q06945 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC7.13□□□□□ -1.27
SOX4Q06945 AADACP1-206ENST00000561502 1193 ntBASIC7.13□□□□□ -1.27
SOX4Q06945 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC7.13□□□□□ -1.27
SOX4Q06945 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC7.13□□□□□ -1.27
SOX4Q06945 AC092325.1-201ENST00000566449 554 ntBASIC7.13□□□□□ -1.27
SOX4Q06945 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC7.13□□□□□ -1.27
SOX4Q06945 LSM1P2-201ENST00000604911 322 ntBASIC7.13□□□□□ -1.27
SOX4Q06945 AP003117.2-201ENST00000606010 545 ntBASIC7.13□□□□□ -1.27
SOX4Q06945 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC7.13□□□□□ -1.27
SOX4Q06945 AC093635.1-201ENST00000609028 555 ntBASIC7.13□□□□□ -1.27
SOX4Q06945 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SOX4Q06945 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
SOX4Q06945 MIR8089-201ENST00000620165 82 ntBASIC7.13□□□□□ -1.27
SOX4Q06945 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC7.13□□□□□ -1.27
SOX4Q06945 RPSAP68-201ENST00000625020 438 ntBASIC7.13□□□□□ -1.27
SOX4Q06945 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC7.13□□□□□ -1.27
SOX4Q06945 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC7.13□□□□□ -1.27
SOX4Q06945 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
SOX4Q06945 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
SOX4Q06945 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
SOX4Q06945 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SOX4Q06945 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
SOX4Q06945 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
SOX4Q06945 OR4G1P-202ENST00000641173 1788 ntBASIC7.13□□□□□ -1.27
SOX4Q06945 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
SOX4Q06945 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC7.12□□□□□ -1.27
SOX4Q06945 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SOX4Q06945 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC7.12□□□□□ -1.27
SOX4Q06945 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC7.12□□□□□ -1.27
SOX4Q06945 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SOX4Q06945 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SOX4Q06945 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
SOX4Q06945 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SOX4Q06945 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SOX4Q06945 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SOX4Q06945 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SOX4Q06945 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
SOX4Q06945 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC7.12□□□□□ -1.27
SOX4Q06945 Y_RNA.303-201ENST00000364998 94 ntBASIC7.12□□□□□ -1.27
SOX4Q06945 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
SOX4Q06945 MIR548F1-201ENST00000408667 84 ntBASIC7.12□□□□□ -1.27
SOX4Q06945 AL929472.1-201ENST00000417484 429 ntBASIC7.12□□□□□ -1.27
SOX4Q06945 RPS27AP7-201ENST00000422792 455 ntBASIC7.12□□□□□ -1.27
SOX4Q06945 AC097721.1-201ENST00000427150 1253 ntBASIC7.12□□□□□ -1.27
SOX4Q06945 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC7.12□□□□□ -1.27
SOX4Q06945 MTND1P2-201ENST00000430604 821 ntBASIC7.12□□□□□ -1.27
SOX4Q06945 VN1R54P-201ENST00000435210 1049 ntBASIC7.12□□□□□ -1.27
SOX4Q06945 AC245452.2-201ENST00000435222 392 ntBASIC7.12□□□□□ -1.27
SOX4Q06945 AC122718.1-201ENST00000439448 744 ntBASIC7.12□□□□□ -1.27
SOX4Q06945 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC7.12□□□□□ -1.27
SOX4Q06945 AL592447.1-201ENST00000447592 540 ntBASIC7.12□□□□□ -1.27
SOX4Q06945 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC7.12□□□□□ -1.27
SOX4Q06945 AL358876.1-201ENST00000453364 1075 ntBASIC7.12□□□□□ -1.27
SOX4Q06945 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SOX4Q06945 SULT1D1P-201ENST00000458020 882 ntBASIC7.12□□□□□ -1.27
SOX4Q06945 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC7.12□□□□□ -1.27
SOX4Q06945 FAM133DP-201ENST00000464802 691 ntBASIC7.12□□□□□ -1.27
SOX4Q06945 AC107015.1-201ENST00000466902 747 ntBASIC7.12□□□□□ -1.27
SOX4Q06945 AC106800.2-201ENST00000514009 1103 ntBASIC7.12□□□□□ -1.27
SOX4Q06945 FABP5P5-201ENST00000515537 406 ntBASIC7.12□□□□□ -1.27
SOX4Q06945 SCARNA5-201ENST00000516201 276 ntBASIC7.12□□□□□ -1.27
SOX4Q06945 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC7.12□□□□□ -1.27
SOX4Q06945 AC024405.1-201ENST00000532521 1042 ntBASIC7.12□□□□□ -1.27
SOX4Q06945 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC7.12□□□□□ -1.27
SOX4Q06945 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC7.12□□□□□ -1.27
SOX4Q06945 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC7.12□□□□□ -1.27
SOX4Q06945 MT1CP-201ENST00000567054 174 ntBASIC7.12□□□□□ -1.27
SOX4Q06945 AC106785.4-201ENST00000569492 412 ntBASIC7.12□□□□□ -1.27
SOX4Q06945 RN7SL199P-201ENST00000578752 281 ntBASIC7.12□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms