Protein–RNA interactions for Protein: Q05682

CALD1, Caldesmon, humanhuman

Known RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1Q05682 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC7.27□□□□□ -1.24
CALD1Q05682 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC7.27□□□□□ -1.25
CALD1Q05682 AL603750.1-201ENST00000624216 1717 ntBASIC7.27□□□□□ -1.25
CALD1Q05682 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CALD1Q05682 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CALD1Q05682 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC7.27□□□□□ -1.25
CALD1Q05682 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC7.27□□□□□ -1.25
CALD1Q05682 RN7SKP206-201ENST00000410823 293 ntBASIC7.27□□□□□ -1.25
CALD1Q05682 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CALD1Q05682 HNRNPA1P29-201ENST00000426409 879 ntBASIC7.27□□□□□ -1.25
CALD1Q05682 BTG3P1-201ENST00000435859 716 ntBASIC7.27□□□□□ -1.25
CALD1Q05682 OR6D1P-201ENST00000436165 939 ntBASIC7.27□□□□□ -1.25
CALD1Q05682 AL391987.1-201ENST00000441025 200 ntBASIC7.27□□□□□ -1.25
CALD1Q05682 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CALD1Q05682 RN7SL174P-201ENST00000475578 289 ntBASIC7.27□□□□□ -1.25
CALD1Q05682 AL136038.1-201ENST00000497246 351 ntBASIC7.27□□□□□ -1.25
CALD1Q05682 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC7.27□□□□□ -1.25
CALD1Q05682 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC7.27□□□□□ -1.25
CALD1Q05682 AP001357.1-201ENST00000586304 1053 ntBASIC7.27□□□□□ -1.25
CALD1Q05682 AC015712.7-201ENST00000615211 635 ntBASIC7.27□□□□□ -1.25
CALD1Q05682 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC7.27□□□□□ -1.25
CALD1Q05682 AC079776.5-201ENST00000641920 211 ntBASIC7.27□□□□□ -1.25
CALD1Q05682 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CALD1Q05682 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CALD1Q05682 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC7.27□□□□□ -1.25
CALD1Q05682 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CALD1Q05682 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CALD1Q05682 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CALD1Q05682 AL078595.2-201ENST00000605309 1780 ntBASIC7.26□□□□□ -1.25
CALD1Q05682 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
CALD1Q05682 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
CALD1Q05682 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC7.26□□□□□ -1.25
CALD1Q05682 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC7.26□□□□□ -1.25
CALD1Q05682 RN7SKP124-201ENST00000364730 341 ntBASIC7.26□□□□□ -1.25
CALD1Q05682 RN7SKP28-201ENST00000364770 305 ntBASIC7.26□□□□□ -1.25
CALD1Q05682 AC007161.1-204ENST00000423039 460 ntBASIC7.26□□□□□ -1.25
CALD1Q05682 CHEK2P5-201ENST00000423877 246 ntBASIC7.26□□□□□ -1.25
CALD1Q05682 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC7.26□□□□□ -1.25
CALD1Q05682 AC073072.2-201ENST00000447425 348 ntBASIC7.26□□□□□ -1.25
CALD1Q05682 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC7.26□□□□□ -1.25
CALD1Q05682 RN7SL188P-201ENST00000469842 285 ntBASIC7.26□□□□□ -1.25
CALD1Q05682 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC7.26□□□□□ -1.25
CALD1Q05682 RN7SL101P-201ENST00000496350 279 ntBASIC7.26□□□□□ -1.25
CALD1Q05682 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC7.26□□□□□ -1.25
CALD1Q05682 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC7.26□□□□□ -1.25
CALD1Q05682 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC7.26□□□□□ -1.25
CALD1Q05682 OR5AM1P-201ENST00000532136 1032 ntBASIC7.26□□□□□ -1.25
CALD1Q05682 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC7.26□□□□□ -1.25
CALD1Q05682 AC090286.3-201ENST00000573133 187 ntBASIC7.26□□□□□ -1.25
CALD1Q05682 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC7.26□□□□□ -1.25
CALD1Q05682 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC7.26□□□□□ -1.25
CALD1Q05682 AL589674.2-201ENST00000604304 337 ntBASIC7.26□□□□□ -1.25
CALD1Q05682 FAM72A-208ENST00000607379 1139 ntBASIC7.26□□□□□ -1.25
CALD1Q05682 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC7.26□□□□□ -1.25
CALD1Q05682 AC004477.3-201ENST00000614061 590 ntBASIC7.26□□□□□ -1.25
CALD1Q05682 AC241377.1-201ENST00000619797 406 ntBASIC7.26□□□□□ -1.25
CALD1Q05682 AP003072.5-201ENST00000623872 773 ntBASIC7.26□□□□□ -1.25
CALD1Q05682 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC7.26□□□□□ -1.25
CALD1Q05682 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC7.26□□□□□ -1.25
CALD1Q05682 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CALD1Q05682 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CALD1Q05682 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CALD1Q05682 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC7.26□□□□□ -1.25
CALD1Q05682 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
CALD1Q05682 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC7.26□□□□□ -1.25
CALD1Q05682 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CALD1Q05682 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CALD1Q05682 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CALD1Q05682 AC011933.2-201ENST00000578539 2790 ntBASIC7.25□□□□□ -1.25
CALD1Q05682 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CALD1Q05682 RNA5SP242-201ENST00000364171 118 ntBASIC7.25□□□□□ -1.25
CALD1Q05682 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CALD1Q05682 AL121776.1-201ENST00000429337 372 ntBASIC7.25□□□□□ -1.25
CALD1Q05682 LINC02210-201ENST00000444561 288 ntBASIC7.25□□□□□ -1.25
CALD1Q05682 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC7.25□□□□□ -1.25
CALD1Q05682 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC7.25□□□□□ -1.25
CALD1Q05682 PSAT1P4-201ENST00000466500 526 ntBASIC7.25□□□□□ -1.25
CALD1Q05682 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC7.25□□□□□ -1.25
CALD1Q05682 FTH1P11-201ENST00000517577 551 ntBASIC7.25□□□□□ -1.25
CALD1Q05682 AC136777.2-201ENST00000522979 358 ntBASIC7.25□□□□□ -1.25
CALD1Q05682 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
CALD1Q05682 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC7.25□□□□□ -1.25
CALD1Q05682 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC7.25□□□□□ -1.25
CALD1Q05682 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CALD1Q05682 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
CALD1Q05682 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CALD1Q05682 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
CALD1Q05682 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC7.25□□□□□ -1.25
CALD1Q05682 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CALD1Q05682 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC7.25□□□□□ -1.25
CALD1Q05682 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CALD1Q05682 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CALD1Q05682 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CALD1Q05682 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
CALD1Q05682 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CALD1Q05682 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC7.24□□□□□ -1.25
CALD1Q05682 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CALD1Q05682 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC7.24□□□□□ -1.25
CALD1Q05682 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
CALD1Q05682 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC7.24□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms