Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 GAPDHP24-201ENST00000328713 983 ntBASIC4.66□□□□□ -1.66
LMO4P61968 RNU6-171P-201ENST00000384354 107 ntBASIC4.66□□□□□ -1.66
LMO4P61968 MIR105-2-201ENST00000385083 81 ntBASIC4.66□□□□□ -1.66
LMO4P61968 RPL23AP17-201ENST00000401064 499 ntBASIC4.66□□□□□ -1.66
LMO4P61968 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.66□□□□□ -1.66
LMO4P61968 RN7SKP199-201ENST00000410325 305 ntBASIC4.66□□□□□ -1.66
LMO4P61968 AC098592.2-201ENST00000413158 265 ntBASIC4.66□□□□□ -1.66
LMO4P61968 AC096644.3-201ENST00000416788 338 ntBASIC4.66□□□□□ -1.66
LMO4P61968 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC4.66□□□□□ -1.66
LMO4P61968 CRIP1P1-201ENST00000427567 185 ntBASIC4.66□□□□□ -1.66
LMO4P61968 MTCYBP32-201ENST00000427945 1084 ntBASIC4.66□□□□□ -1.66
LMO4P61968 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.66□□□□□ -1.66
LMO4P61968 AL627308.1-201ENST00000435693 821 ntBASIC4.66□□□□□ -1.66
LMO4P61968 RPS3AP38-201ENST00000435889 763 ntBASIC4.66□□□□□ -1.66
LMO4P61968 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC4.66□□□□□ -1.66
LMO4P61968 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC4.66□□□□□ -1.66
LMO4P61968 MEMO1P4-201ENST00000453590 386 ntBASIC4.66□□□□□ -1.66
LMO4P61968 CYCSP53-201ENST00000455540 265 ntBASIC4.66□□□□□ -1.66
LMO4P61968 RN7SL51P-201ENST00000468230 285 ntBASIC4.66□□□□□ -1.66
LMO4P61968 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC4.66□□□□□ -1.66
LMO4P61968 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC4.66□□□□□ -1.66
LMO4P61968 snoU109.5-201ENST00000516231 132 ntBASIC4.66□□□□□ -1.66
LMO4P61968 IGLV3-24-201ENST00000517477 197 ntBASIC4.66□□□□□ -1.66
LMO4P61968 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC4.66□□□□□ -1.66
LMO4P61968 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC4.66□□□□□ -1.66
LMO4P61968 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC4.66□□□□□ -1.66
LMO4P61968 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
LMO4P61968 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC4.66□□□□□ -1.66
LMO4P61968 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.66□□□□□ -1.66
LMO4P61968 MIR4311-201ENST00000580794 100 ntBASIC4.66□□□□□ -1.66
LMO4P61968 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC4.66□□□□□ -1.66
LMO4P61968 AC012616.1-201ENST00000600294 197 ntBASIC4.66□□□□□ -1.66
LMO4P61968 AC092944.2-201ENST00000605443 889 ntBASIC4.66□□□□□ -1.66
LMO4P61968 AL139022.2-201ENST00000606934 443 ntBASIC4.66□□□□□ -1.66
LMO4P61968 AL391597.1-201ENST00000618707 694 ntBASIC4.66□□□□□ -1.66
LMO4P61968 AC048344.4-201ENST00000619744 527 ntBASIC4.66□□□□□ -1.66
LMO4P61968 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
LMO4P61968 MTCO1P1-201ENST00000624263 1081 ntBASIC4.66□□□□□ -1.66
LMO4P61968 AC021766.1-201ENST00000624404 741 ntBASIC4.66□□□□□ -1.66
LMO4P61968 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.66□□□□□ -1.66
LMO4P61968 AC106858.1-201ENST00000637497 429 ntBASIC4.66□□□□□ -1.66
LMO4P61968 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC4.66□□□□□ -1.66
LMO4P61968 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LMO4P61968 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
LMO4P61968 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LMO4P61968 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LMO4P61968 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
LMO4P61968 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.66□□□□□ -1.66
LMO4P61968 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC4.65□□□□□ -1.66
LMO4P61968 AC020656.2-201ENST00000613291 5309 ntBASIC4.65□□□□□ -1.66
LMO4P61968 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
LMO4P61968 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
LMO4P61968 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC4.65□□□□□ -1.66
LMO4P61968 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
LMO4P61968 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
LMO4P61968 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
LMO4P61968 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
LMO4P61968 OFD1P8Y-201ENST00000449148 1433 ntBASIC4.65□□□□□ -1.66
LMO4P61968 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.66
LMO4P61968 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.66
LMO4P61968 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
LMO4P61968 Y_RNA.110-201ENST00000363220 99 ntBASIC4.65□□□□□ -1.67
LMO4P61968 U3.7-201ENST00000363668 216 ntBASIC4.65□□□□□ -1.67
LMO4P61968 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
LMO4P61968 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
LMO4P61968 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
LMO4P61968 RNA5SP91-201ENST00000390902 119 ntBASIC4.65□□□□□ -1.67
LMO4P61968 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.65□□□□□ -1.67
LMO4P61968 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
LMO4P61968 RNA5SP251-201ENST00000410614 137 ntBASIC4.65□□□□□ -1.67
LMO4P61968 AC016769.2-201ENST00000414815 475 ntBASIC4.65□□□□□ -1.67
LMO4P61968 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC4.65□□□□□ -1.67
LMO4P61968 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
LMO4P61968 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC4.65□□□□□ -1.67
LMO4P61968 OR6D1P-201ENST00000436165 939 ntBASIC4.65□□□□□ -1.67
LMO4P61968 CYCSP12-201ENST00000437729 300 ntBASIC4.65□□□□□ -1.67
LMO4P61968 SCAND3P1-201ENST00000439854 1060 ntBASIC4.65□□□□□ -1.67
LMO4P61968 OR6C72P-201ENST00000451403 892 ntBASIC4.65□□□□□ -1.67
LMO4P61968 RPL7P45-201ENST00000455851 743 ntBASIC4.65□□□□□ -1.67
LMO4P61968 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.65□□□□□ -1.67
LMO4P61968 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4.65□□□□□ -1.67
LMO4P61968 AC105420.1-201ENST00000504389 582 ntBASIC4.65□□□□□ -1.67
LMO4P61968 AC024558.1-201ENST00000505008 528 ntBASIC4.65□□□□□ -1.67
LMO4P61968 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC4.65□□□□□ -1.67
LMO4P61968 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC4.65□□□□□ -1.67
LMO4P61968 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.65□□□□□ -1.67
LMO4P61968 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.65□□□□□ -1.67
LMO4P61968 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.65□□□□□ -1.67
LMO4P61968 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC4.65□□□□□ -1.67
LMO4P61968 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC4.65□□□□□ -1.67
LMO4P61968 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC4.65□□□□□ -1.67
LMO4P61968 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
LMO4P61968 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.65□□□□□ -1.67
LMO4P61968 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.65□□□□□ -1.67
LMO4P61968 AL731537.2-201ENST00000561565 951 ntBASIC4.65□□□□□ -1.67
LMO4P61968 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC4.65□□□□□ -1.67
LMO4P61968 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.65□□□□□ -1.67
LMO4P61968 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC4.65□□□□□ -1.67
LMO4P61968 MIR4760-201ENST00000585040 80 ntBASIC4.65□□□□□ -1.67
LMO4P61968 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 137.3 ms