Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 FTO-203ENST00000460382 1517 ntTSL 5 BASIC6.07□□□□□ -1.44
HDAC4P56524 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HDAC4P56524 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HDAC4P56524 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HDAC4P56524 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.07□□□□□ -1.44
HDAC4P56524 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
HDAC4P56524 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HDAC4P56524 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.07□□□□□ -1.44
HDAC4P56524 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.07□□□□□ -1.44
HDAC4P56524 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC6.07□□□□□ -1.44
HDAC4P56524 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
HDAC4P56524 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HDAC4P56524 PDZK1P1-202ENST00000425209 1350 ntBASIC6.06□□□□□ -1.44
HDAC4P56524 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.06□□□□□ -1.44
HDAC4P56524 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
HDAC4P56524 KYNUP3-201ENST00000574386 1341 ntBASIC6.06□□□□□ -1.44
HDAC4P56524 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.06□□□□□ -1.44
HDAC4P56524 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HDAC4P56524 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HDAC4P56524 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
HDAC4P56524 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HDAC4P56524 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HDAC4P56524 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HDAC4P56524 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HDAC4P56524 SNORA40.4-201ENST00000390971 128 ntBASIC6.06□□□□□ -1.44
HDAC4P56524 MIR1203-201ENST00000408812 85 ntBASIC6.06□□□□□ -1.44
HDAC4P56524 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.06□□□□□ -1.44
HDAC4P56524 MRPL53P1-201ENST00000414323 319 ntBASIC6.06□□□□□ -1.44
HDAC4P56524 RAB9AP4-201ENST00000415230 609 ntBASIC6.06□□□□□ -1.44
HDAC4P56524 AL354868.1-201ENST00000417077 482 ntBASIC6.06□□□□□ -1.44
HDAC4P56524 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HDAC4P56524 AL034379.1-201ENST00000423216 253 ntBASIC6.06□□□□□ -1.44
HDAC4P56524 DEFA9P-201ENST00000433042 285 ntBASIC6.06□□□□□ -1.44
HDAC4P56524 DNAJA1P5-201ENST00000440278 943 ntBASIC6.06□□□□□ -1.44
HDAC4P56524 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HDAC4P56524 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HDAC4P56524 NFU1-207ENST00000462320 558 ntTSL 4 BASIC6.06□□□□□ -1.44
HDAC4P56524 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.06□□□□□ -1.44
HDAC4P56524 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.06□□□□□ -1.44
HDAC4P56524 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC6.06□□□□□ -1.44
HDAC4P56524 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC6.06□□□□□ -1.44
HDAC4P56524 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC6.06□□□□□ -1.44
HDAC4P56524 GAPDHP71-201ENST00000511530 1003 ntBASIC6.06□□□□□ -1.44
HDAC4P56524 AC114781.3-201ENST00000512083 142 ntBASIC6.06□□□□□ -1.44
HDAC4P56524 AC097486.1-201ENST00000515331 210 ntBASIC6.06□□□□□ -1.44
HDAC4P56524 SCARNA21.2-201ENST00000516600 166 ntBASIC6.06□□□□□ -1.44
HDAC4P56524 AC060775.1-201ENST00000518241 520 ntBASIC6.06□□□□□ -1.44
HDAC4P56524 IGLVIV-64-201ENST00000518581 301 ntBASIC6.06□□□□□ -1.44
HDAC4P56524 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.06□□□□□ -1.44
HDAC4P56524 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.06□□□□□ -1.44
HDAC4P56524 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
HDAC4P56524 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.06□□□□□ -1.44
HDAC4P56524 AC108865.2-201ENST00000606881 432 ntBASIC6.06□□□□□ -1.44
HDAC4P56524 OR51C1P-201ENST00000608504 942 ntBASIC6.06□□□□□ -1.44
HDAC4P56524 AL590410.1-201ENST00000617925 333 ntBASIC6.06□□□□□ -1.44
HDAC4P56524 AL356094.1-201ENST00000624663 1212 ntBASIC6.06□□□□□ -1.44
HDAC4P56524 AC022919.1-201ENST00000624979 626 ntBASIC6.06□□□□□ -1.44
HDAC4P56524 MIR4302-201ENST00000638058 60 ntBASIC6.06□□□□□ -1.44
HDAC4P56524 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.06□□□□□ -1.44
HDAC4P56524 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
HDAC4P56524 AP004607.3-201ENST00000530354 3915 ntBASIC6.06□□□□□ -1.44
HDAC4P56524 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
HDAC4P56524 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HDAC4P56524 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
HDAC4P56524 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.06□□□□□ -1.44
HDAC4P56524 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.06□□□□□ -1.44
HDAC4P56524 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.06□□□□□ -1.44
HDAC4P56524 TCP11X1-202ENST00000622971 1372 ntBASIC6.06□□□□□ -1.44
HDAC4P56524 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.06□□□□□ -1.44
HDAC4P56524 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
HDAC4P56524 AL603750.1-201ENST00000624216 1717 ntBASIC6.05□□□□□ -1.44
HDAC4P56524 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
HDAC4P56524 AC011503.2-201ENST00000594230 1500 ntBASIC6.05□□□□□ -1.44
HDAC4P56524 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
HDAC4P56524 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.05□□□□□ -1.44
HDAC4P56524 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HDAC4P56524 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HDAC4P56524 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HDAC4P56524 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.05□□□□□ -1.44
HDAC4P56524 GABARAPL3-201ENST00000412799 354 ntBASIC6.05□□□□□ -1.44
HDAC4P56524 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC6.05□□□□□ -1.44
HDAC4P56524 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC6.05□□□□□ -1.44
HDAC4P56524 AC115283.1-201ENST00000427353 400 ntBASIC6.05□□□□□ -1.44
HDAC4P56524 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC6.05□□□□□ -1.44
HDAC4P56524 MTCO1P57-201ENST00000432182 261 ntBASIC6.05□□□□□ -1.44
HDAC4P56524 NDUFA5P1-201ENST00000433858 341 ntBASIC6.05□□□□□ -1.44
HDAC4P56524 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.05□□□□□ -1.44
HDAC4P56524 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC6.05□□□□□ -1.44
HDAC4P56524 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.05□□□□□ -1.44
HDAC4P56524 HLA-DPA3-207ENST00000454398 229 ntBASIC6.05□□□□□ -1.44
HDAC4P56524 RPL12P39-201ENST00000455456 496 ntBASIC6.05□□□□□ -1.44
HDAC4P56524 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HDAC4P56524 AC099521.1-201ENST00000482557 334 ntBASIC6.05□□□□□ -1.44
HDAC4P56524 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HDAC4P56524 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC6.05□□□□□ -1.44
HDAC4P56524 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.05□□□□□ -1.44
HDAC4P56524 FTH1P11-201ENST00000517577 551 ntBASIC6.05□□□□□ -1.44
HDAC4P56524 AP000648.1-201ENST00000529682 397 ntBASIC6.05□□□□□ -1.44
HDAC4P56524 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC6.05□□□□□ -1.44
HDAC4P56524 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms