Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
GFRA1P56159 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
GFRA1P56159 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC6.19□□□□□ -1.42
GFRA1P56159 AC027514.1-201ENST00000588561 1603 ntBASIC6.19□□□□□ -1.42
GFRA1P56159 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
GFRA1P56159 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC6.19□□□□□ -1.42
GFRA1P56159 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
GFRA1P56159 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
GFRA1P56159 RNA5SP382-201ENST00000363355 112 ntBASIC6.19□□□□□ -1.42
GFRA1P56159 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
GFRA1P56159 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
GFRA1P56159 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
GFRA1P56159 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
GFRA1P56159 MIR199B-201ENST00000384849 110 ntBASIC6.19□□□□□ -1.42
GFRA1P56159 ARSFP1-201ENST00000398758 477 ntBASIC6.19□□□□□ -1.42
GFRA1P56159 MIR1204-201ENST00000408388 67 ntBASIC6.19□□□□□ -1.42
GFRA1P56159 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC6.19□□□□□ -1.42
GFRA1P56159 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC6.19□□□□□ -1.42
GFRA1P56159 AC019050.1-201ENST00000418508 492 ntBASIC6.19□□□□□ -1.42
GFRA1P56159 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC6.19□□□□□ -1.42
GFRA1P56159 PTPN2P1-201ENST00000423212 1072 ntBASIC6.19□□□□□ -1.42
GFRA1P56159 AL049610.1-201ENST00000423374 372 ntBASIC6.19□□□□□ -1.42
GFRA1P56159 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC6.19□□□□□ -1.42
GFRA1P56159 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC6.19□□□□□ -1.42
GFRA1P56159 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC6.19□□□□□ -1.42
GFRA1P56159 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC6.19□□□□□ -1.42
GFRA1P56159 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC6.19□□□□□ -1.42
GFRA1P56159 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC6.19□□□□□ -1.42
GFRA1P56159 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC6.19□□□□□ -1.42
GFRA1P56159 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
GFRA1P56159 AC073476.1-201ENST00000452854 407 ntBASIC6.19□□□□□ -1.42
GFRA1P56159 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.19□□□□□ -1.42
GFRA1P56159 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC6.19□□□□□ -1.42
GFRA1P56159 RNU7-27P-201ENST00000459281 62 ntBASIC6.19□□□□□ -1.42
GFRA1P56159 SETP11-201ENST00000473027 690 ntBASIC6.19□□□□□ -1.42
GFRA1P56159 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
GFRA1P56159 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
GFRA1P56159 RPL5P14-201ENST00000494197 878 ntBASIC6.19□□□□□ -1.42
GFRA1P56159 RPL23AP80-201ENST00000495605 424 ntBASIC6.19□□□□□ -1.42
GFRA1P56159 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
GFRA1P56159 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC6.19□□□□□ -1.42
GFRA1P56159 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC6.19□□□□□ -1.42
GFRA1P56159 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC6.19□□□□□ -1.42
GFRA1P56159 RPL7L1P4-201ENST00000513004 707 ntBASIC6.19□□□□□ -1.42
GFRA1P56159 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
GFRA1P56159 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC6.19□□□□□ -1.42
GFRA1P56159 MINOS1P4-201ENST00000515470 318 ntBASIC6.19□□□□□ -1.42
GFRA1P56159 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.19□□□□□ -1.42
GFRA1P56159 AC106038.2-201ENST00000520706 568 ntBASIC6.19□□□□□ -1.42
GFRA1P56159 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC6.19□□□□□ -1.42
GFRA1P56159 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC6.19□□□□□ -1.42
GFRA1P56159 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC6.19□□□□□ -1.42
GFRA1P56159 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC6.19□□□□□ -1.42
GFRA1P56159 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
GFRA1P56159 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC6.19□□□□□ -1.42
GFRA1P56159 AC027796.1-201ENST00000575593 512 ntBASIC6.19□□□□□ -1.42
GFRA1P56159 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC6.19□□□□□ -1.42
GFRA1P56159 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.19□□□□□ -1.42
GFRA1P56159 LINC00906-202ENST00000587998 648 ntTSL 3 BASIC6.19□□□□□ -1.42
GFRA1P56159 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC6.19□□□□□ -1.42
GFRA1P56159 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC6.19□□□□□ -1.42
GFRA1P56159 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC6.19□□□□□ -1.42
GFRA1P56159 AC092354.2-201ENST00000607786 514 ntBASIC6.19□□□□□ -1.42
GFRA1P56159 AC026951.2-201ENST00000613847 241 ntBASIC6.19□□□□□ -1.42
GFRA1P56159 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
GFRA1P56159 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
GFRA1P56159 AC018755.4-201ENST00000619715 454 ntBASIC6.19□□□□□ -1.42
GFRA1P56159 AL138693.1-201ENST00000622219 129 ntBASIC6.19□□□□□ -1.42
GFRA1P56159 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC6.19□□□□□ -1.42
GFRA1P56159 MBD5-221ENST00000637159 902 ntTSL 5 BASIC6.19□□□□□ -1.42
GFRA1P56159 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC6.19□□□□□ -1.42
GFRA1P56159 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.19□□□□□ -1.42
GFRA1P56159 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.19□□□□□ -1.42
GFRA1P56159 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC6.19□□□□□ -1.42
GFRA1P56159 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC6.19□□□□□ -1.42
GFRA1P56159 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
GFRA1P56159 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
GFRA1P56159 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
GFRA1P56159 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC6.19□□□□□ -1.42
GFRA1P56159 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
GFRA1P56159 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
GFRA1P56159 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
GFRA1P56159 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
GFRA1P56159 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
GFRA1P56159 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
GFRA1P56159 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
GFRA1P56159 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
GFRA1P56159 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC6.18□□□□□ -1.42
GFRA1P56159 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
GFRA1P56159 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC6.18□□□□□ -1.42
GFRA1P56159 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC6.18□□□□□ -1.42
GFRA1P56159 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC6.18□□□□□ -1.42
GFRA1P56159 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
GFRA1P56159 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
GFRA1P56159 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
GFRA1P56159 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC6.18□□□□□ -1.42
GFRA1P56159 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
GFRA1P56159 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC6.18□□□□□ -1.42
GFRA1P56159 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
GFRA1P56159 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms