Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AL731537.2-201ENST00000561565 951 ntBASIC5.54□□□□□ -1.52
CDH13P55290 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.54□□□□□ -1.52
CDH13P55290 AC008507.3-201ENST00000585753 472 ntBASIC5.54□□□□□ -1.52
CDH13P55290 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.54□□□□□ -1.52
CDH13P55290 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.54□□□□□ -1.52
CDH13P55290 AC073111.2-201ENST00000605657 1075 ntBASIC5.54□□□□□ -1.52
CDH13P55290 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDH13P55290 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDH13P55290 AL683826.1-201ENST00000624104 627 ntBASIC5.54□□□□□ -1.52
CDH13P55290 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.54□□□□□ -1.52
CDH13P55290 CASC19-274ENST00000642018 970 ntBASIC5.54□□□□□ -1.52
CDH13P55290 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDH13P55290 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDH13P55290 AL356317.1-201ENST00000396110 1436 ntBASIC5.54□□□□□ -1.52
CDH13P55290 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDH13P55290 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.54□□□□□ -1.52
CDH13P55290 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDH13P55290 AC015689.2-201ENST00000528172 1738 ntBASIC5.54□□□□□ -1.52
CDH13P55290 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
CDH13P55290 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDH13P55290 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.53□□□□□ -1.52
CDH13P55290 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDH13P55290 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDH13P55290 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.53□□□□□ -1.52
CDH13P55290 AC018809.2-201ENST00000602436 3823 ntBASIC5.53□□□□□ -1.52
CDH13P55290 AC125336.1-201ENST00000508893 2827 ntBASIC5.53□□□□□ -1.52
CDH13P55290 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDH13P55290 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDH13P55290 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDH13P55290 LINC02019-201ENST00000608605 2060 ntBASIC5.53□□□□□ -1.52
CDH13P55290 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC5.53□□□□□ -1.52
CDH13P55290 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.53□□□□□ -1.52
CDH13P55290 AL121886.1-201ENST00000358609 435 ntBASIC5.53□□□□□ -1.52
CDH13P55290 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.53□□□□□ -1.52
CDH13P55290 RNA5SP273-201ENST00000362484 113 ntBASIC5.53□□□□□ -1.52
CDH13P55290 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.53□□□□□ -1.52
CDH13P55290 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDH13P55290 RNU6-883P-201ENST00000384597 107 ntBASIC5.53□□□□□ -1.52
CDH13P55290 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.53□□□□□ -1.52
CDH13P55290 ST13P16-201ENST00000401760 781 ntBASIC5.53□□□□□ -1.52
CDH13P55290 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.53□□□□□ -1.52
CDH13P55290 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.53□□□□□ -1.52
CDH13P55290 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.53□□□□□ -1.52
CDH13P55290 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.53□□□□□ -1.52
CDH13P55290 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.53□□□□□ -1.52
CDH13P55290 NDUFS5P5-201ENST00000437256 321 ntBASIC5.53□□□□□ -1.52
CDH13P55290 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.53□□□□□ -1.52
CDH13P55290 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.53□□□□□ -1.52
CDH13P55290 MED28P3-201ENST00000444288 531 ntBASIC5.53□□□□□ -1.52
CDH13P55290 AC023271.1-201ENST00000445936 1090 ntBASIC5.53□□□□□ -1.52
CDH13P55290 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.53□□□□□ -1.52
CDH13P55290 AC239798.3-201ENST00000454459 408 ntBASIC5.53□□□□□ -1.52
CDH13P55290 AC019084.1-201ENST00000457337 432 ntBASIC5.53□□□□□ -1.52
CDH13P55290 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.53□□□□□ -1.52
CDH13P55290 AC068228.1-201ENST00000461723 211 ntBASIC5.53□□□□□ -1.52
CDH13P55290 AL122020.1-201ENST00000472287 459 ntBASIC5.53□□□□□ -1.52
CDH13P55290 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDH13P55290 AC073610.1-201ENST00000489971 396 ntBASIC5.53□□□□□ -1.52
CDH13P55290 RPS17P5-201ENST00000498293 408 ntBASIC5.53□□□□□ -1.52
CDH13P55290 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.53□□□□□ -1.52
CDH13P55290 AC074255.1-201ENST00000511259 501 ntBASIC5.53□□□□□ -1.52
CDH13P55290 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.53□□□□□ -1.52
CDH13P55290 RNA5SP438-201ENST00000516561 112 ntBASIC5.53□□□□□ -1.52
CDH13P55290 SCARNA6.1-201ENST00000516989 238 ntBASIC5.53□□□□□ -1.52
CDH13P55290 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.53□□□□□ -1.52
CDH13P55290 AP003168.1-201ENST00000530091 307 ntBASIC5.53□□□□□ -1.52
CDH13P55290 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.53□□□□□ -1.52
CDH13P55290 AC008147.3-201ENST00000548666 354 ntBASIC5.53□□□□□ -1.52
CDH13P55290 AC079905.1-201ENST00000549280 475 ntBASIC5.53□□□□□ -1.52
CDH13P55290 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC5.53□□□□□ -1.52
CDH13P55290 CYCSP38-201ENST00000559840 322 ntBASIC5.53□□□□□ -1.52
CDH13P55290 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.53□□□□□ -1.52
CDH13P55290 FAM27E4-201ENST00000605259 342 ntBASIC5.53□□□□□ -1.52
CDH13P55290 AP005131.7-201ENST00000610087 611 ntBASIC5.53□□□□□ -1.52
CDH13P55290 MIR6133-201ENST00000617057 108 ntBASIC5.53□□□□□ -1.52
CDH13P55290 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CDH13P55290 AC022919.1-201ENST00000624979 626 ntBASIC5.53□□□□□ -1.52
CDH13P55290 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.53□□□□□ -1.52
CDH13P55290 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.53□□□□□ -1.52
CDH13P55290 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
CDH13P55290 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDH13P55290 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.53□□□□□ -1.52
CDH13P55290 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDH13P55290 AC144833.1-201ENST00000567953 4089 ntBASIC5.53□□□□□ -1.52
CDH13P55290 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDH13P55290 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CDH13P55290 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.52□□□□□ -1.53
CDH13P55290 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
CDH13P55290 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.52□□□□□ -1.53
CDH13P55290 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.52□□□□□ -1.53
CDH13P55290 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CDH13P55290 AL159987.1-201ENST00000347911 293 ntBASIC5.52□□□□□ -1.53
CDH13P55290 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CDH13P55290 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDH13P55290 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.52□□□□□ -1.53
CDH13P55290 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.52□□□□□ -1.53
CDH13P55290 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CDH13P55290 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.52□□□□□ -1.53
CDH13P55290 CR848007.2-201ENST00000424918 787 ntBASIC5.52□□□□□ -1.53
CDH13P55290 AC106901.1-201ENST00000425086 698 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms