Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.22□□□□□ -1.41
COPAP53621 AC005077.1-201ENST00000449226 375 ntBASIC6.22□□□□□ -1.41
COPAP53621 PSMA2P2-201ENST00000504319 686 ntBASIC6.22□□□□□ -1.41
COPAP53621 TPT1P8-201ENST00000510120 555 ntBASIC6.22□□□□□ -1.41
COPAP53621 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.22□□□□□ -1.41
COPAP53621 MTATP6P1-201ENST00000514057 681 ntBASIC6.22□□□□□ -1.41
COPAP53621 RN7SKP34-201ENST00000516142 244 ntBASIC6.22□□□□□ -1.41
COPAP53621 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.22□□□□□ -1.41
COPAP53621 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.22□□□□□ -1.41
COPAP53621 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.22□□□□□ -1.41
COPAP53621 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC6.22□□□□□ -1.41
COPAP53621 AC092865.1-201ENST00000544395 1023 ntBASIC6.22□□□□□ -1.41
COPAP53621 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC6.22□□□□□ -1.41
COPAP53621 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.22□□□□□ -1.41
COPAP53621 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC6.22□□□□□ -1.41
COPAP53621 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC6.22□□□□□ -1.41
COPAP53621 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
COPAP53621 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.22□□□□□ -1.41
COPAP53621 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
COPAP53621 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.22□□□□□ -1.41
COPAP53621 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.22□□□□□ -1.41
COPAP53621 AC015849.2-201ENST00000605738 409 ntBASIC6.22□□□□□ -1.41
COPAP53621 AC026979.4-201ENST00000606555 645 ntBASIC6.22□□□□□ -1.41
COPAP53621 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.22□□□□□ -1.41
COPAP53621 AL136228.1-201ENST00000622221 319 ntBASIC6.22□□□□□ -1.41
COPAP53621 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6.22□□□□□ -1.41
COPAP53621 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.22□□□□□ -1.41
COPAP53621 AC103703.1-201ENST00000634783 663 ntBASIC6.22□□□□□ -1.41
COPAP53621 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COPAP53621 AC015799.1-201ENST00000622996 3122 ntBASIC6.22□□□□□ -1.41
COPAP53621 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
COPAP53621 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.22□□□□□ -1.41
COPAP53621 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COPAP53621 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COPAP53621 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC6.22□□□□□ -1.41
COPAP53621 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.41
COPAP53621 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
COPAP53621 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.41
COPAP53621 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
COPAP53621 SMG1P7-201ENST00000565246 2704 ntBASIC6.21□□□□□ -1.41
COPAP53621 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
COPAP53621 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
COPAP53621 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
COPAP53621 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
COPAP53621 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.21□□□□□ -1.42
COPAP53621 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
COPAP53621 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
COPAP53621 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
COPAP53621 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.21□□□□□ -1.42
COPAP53621 AC010132.2-201ENST00000295493 1043 ntBASIC6.21□□□□□ -1.42
COPAP53621 TMSB4XP2-201ENST00000335179 210 ntBASIC6.21□□□□□ -1.42
COPAP53621 SNORA43.1-201ENST00000364863 140 ntBASIC6.21□□□□□ -1.42
COPAP53621 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
COPAP53621 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
COPAP53621 GAPDHP15-201ENST00000398586 975 ntBASIC6.21□□□□□ -1.42
COPAP53621 RPL10P10-201ENST00000403509 664 ntBASIC6.21□□□□□ -1.42
COPAP53621 Z86062.1-201ENST00000406773 777 ntBASIC6.21□□□□□ -1.42
COPAP53621 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.21□□□□□ -1.42
COPAP53621 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.21□□□□□ -1.42
COPAP53621 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.21□□□□□ -1.42
COPAP53621 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.21□□□□□ -1.42
COPAP53621 MTND6P12-201ENST00000428247 522 ntBASIC6.21□□□□□ -1.42
COPAP53621 AC092967.1-201ENST00000449016 481 ntBASIC6.21□□□□□ -1.42
COPAP53621 LDHBP2-201ENST00000456969 1005 ntBASIC6.21□□□□□ -1.42
COPAP53621 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.21□□□□□ -1.42
COPAP53621 AC007998.1-201ENST00000474156 672 ntBASIC6.21□□□□□ -1.42
COPAP53621 RN7SL193P-201ENST00000491708 276 ntBASIC6.21□□□□□ -1.42
COPAP53621 RN7SL101P-201ENST00000496350 279 ntBASIC6.21□□□□□ -1.42
COPAP53621 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.21□□□□□ -1.42
COPAP53621 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.21□□□□□ -1.42
COPAP53621 SNORD46.2-201ENST00000516021 102 ntBASIC6.21□□□□□ -1.42
COPAP53621 SCARNA1-201ENST00000517138 166 ntBASIC6.21□□□□□ -1.42
COPAP53621 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC6.21□□□□□ -1.42
COPAP53621 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
COPAP53621 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
COPAP53621 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.21□□□□□ -1.42
COPAP53621 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.21□□□□□ -1.42
COPAP53621 AC027229.1-201ENST00000583887 253 ntBASIC6.21□□□□□ -1.42
COPAP53621 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.21□□□□□ -1.42
COPAP53621 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
COPAP53621 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.21□□□□□ -1.42
COPAP53621 AL021368.3-201ENST00000607119 578 ntBASIC6.21□□□□□ -1.42
COPAP53621 MIR6809-201ENST00000612189 116 ntBASIC6.21□□□□□ -1.42
COPAP53621 MIR1264-201ENST00000616374 69 ntBASIC6.21□□□□□ -1.42
COPAP53621 AC096708.4-201ENST00000620563 552 ntBASIC6.21□□□□□ -1.42
COPAP53621 AL138955.1-201ENST00000622881 1040 ntBASIC6.21□□□□□ -1.42
COPAP53621 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
COPAP53621 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.21□□□□□ -1.42
COPAP53621 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
COPAP53621 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
COPAP53621 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
COPAP53621 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
COPAP53621 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.21□□□□□ -1.42
COPAP53621 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
COPAP53621 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.21□□□□□ -1.42
COPAP53621 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
COPAP53621 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
COPAP53621 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
COPAP53621 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.2□□□□□ -1.42
COPAP53621 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms