Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.25□□□□□ -1.41
COPB1P53618 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
COPB1P53618 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.25□□□□□ -1.41
COPB1P53618 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
COPB1P53618 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
COPB1P53618 AL121886.1-201ENST00000358609 435 ntBASIC6.25□□□□□ -1.41
COPB1P53618 Y_RNA.62-201ENST00000362840 99 ntBASIC6.25□□□□□ -1.41
COPB1P53618 SNORA72.3-201ENST00000365074 132 ntBASIC6.25□□□□□ -1.41
COPB1P53618 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
COPB1P53618 MIR620-201ENST00000385232 95 ntBASIC6.25□□□□□ -1.41
COPB1P53618 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
COPB1P53618 OR7E156P-201ENST00000400303 464 ntBASIC6.25□□□□□ -1.41
COPB1P53618 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.25□□□□□ -1.41
COPB1P53618 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
COPB1P53618 NIFKP3-201ENST00000417799 865 ntBASIC6.25□□□□□ -1.41
COPB1P53618 PLA2G12AP2-201ENST00000424744 264 ntBASIC6.25□□□□□ -1.41
COPB1P53618 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC6.25□□□□□ -1.41
COPB1P53618 MRPS33P4-201ENST00000434892 317 ntBASIC6.25□□□□□ -1.41
COPB1P53618 AL606490.8-201ENST00000441624 319 ntBASIC6.25□□□□□ -1.41
COPB1P53618 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.25□□□□□ -1.41
COPB1P53618 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.25□□□□□ -1.41
COPB1P53618 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.25□□□□□ -1.41
COPB1P53618 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC6.25□□□□□ -1.41
COPB1P53618 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC6.25□□□□□ -1.41
COPB1P53618 RPS23P2-201ENST00000463671 415 ntBASIC6.25□□□□□ -1.41
COPB1P53618 DEFB109A-201ENST00000482450 265 ntBASIC6.25□□□□□ -1.41
COPB1P53618 RPSAP51-201ENST00000497462 645 ntBASIC6.25□□□□□ -1.41
COPB1P53618 AC091874.2-201ENST00000505889 720 ntBASIC6.25□□□□□ -1.41
COPB1P53618 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.25□□□□□ -1.41
COPB1P53618 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC6.25□□□□□ -1.41
COPB1P53618 AC018797.1-201ENST00000510791 255 ntBASIC6.25□□□□□ -1.41
COPB1P53618 AC110760.3-202ENST00000515177 371 ntBASIC6.25□□□□□ -1.41
COPB1P53618 SCARNA1-201ENST00000517138 166 ntBASIC6.25□□□□□ -1.41
COPB1P53618 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC6.25□□□□□ -1.41
COPB1P53618 OR5D2P-201ENST00000524390 911 ntBASIC6.25□□□□□ -1.41
COPB1P53618 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.25□□□□□ -1.41
COPB1P53618 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
COPB1P53618 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
COPB1P53618 MIR4502-201ENST00000580432 81 ntBASIC6.25□□□□□ -1.41
COPB1P53618 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC6.25□□□□□ -1.41
COPB1P53618 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC6.25□□□□□ -1.41
COPB1P53618 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.25□□□□□ -1.41
COPB1P53618 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.25□□□□□ -1.41
COPB1P53618 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC6.25□□□□□ -1.41
COPB1P53618 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.25□□□□□ -1.41
COPB1P53618 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
COPB1P53618 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
COPB1P53618 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
COPB1P53618 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
COPB1P53618 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
COPB1P53618 IFIT1P1-201ENST00000400497 1449 ntBASIC6.25□□□□□ -1.41
COPB1P53618 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
COPB1P53618 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
COPB1P53618 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COPB1P53618 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC6.24□□□□□ -1.41
COPB1P53618 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
COPB1P53618 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
COPB1P53618 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.24□□□□□ -1.41
COPB1P53618 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
COPB1P53618 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COPB1P53618 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
COPB1P53618 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
COPB1P53618 RNA5SP500-201ENST00000364486 119 ntBASIC6.24□□□□□ -1.41
COPB1P53618 RN7SKP15-201ENST00000364742 309 ntBASIC6.24□□□□□ -1.41
COPB1P53618 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
COPB1P53618 SNORA70.6-201ENST00000383934 134 ntBASIC6.24□□□□□ -1.41
COPB1P53618 RNU6-152P-201ENST00000384037 107 ntBASIC6.24□□□□□ -1.41
COPB1P53618 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
COPB1P53618 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.24□□□□□ -1.41
COPB1P53618 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC6.24□□□□□ -1.41
COPB1P53618 RN7SKP240-201ENST00000410583 375 ntBASIC6.24□□□□□ -1.41
COPB1P53618 AL133482.1-201ENST00000415988 498 ntBASIC6.24□□□□□ -1.41
COPB1P53618 AC009506.2-201ENST00000420635 840 ntBASIC6.24□□□□□ -1.41
COPB1P53618 AC073464.3-201ENST00000422564 712 ntBASIC6.24□□□□□ -1.41
COPB1P53618 AJ239321.1-201ENST00000424255 564 ntBASIC6.24□□□□□ -1.41
COPB1P53618 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC6.24□□□□□ -1.41
COPB1P53618 AC115283.1-201ENST00000427353 400 ntBASIC6.24□□□□□ -1.41
COPB1P53618 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC6.24□□□□□ -1.41
COPB1P53618 AC069154.1-201ENST00000432914 542 ntBASIC6.24□□□□□ -1.41
COPB1P53618 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
COPB1P53618 TUBB4BP6-201ENST00000437576 479 ntBASIC6.24□□□□□ -1.41
COPB1P53618 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC6.24□□□□□ -1.41
COPB1P53618 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.24□□□□□ -1.41
COPB1P53618 LINC02210-201ENST00000444561 288 ntBASIC6.24□□□□□ -1.41
COPB1P53618 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC6.24□□□□□ -1.41
COPB1P53618 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
COPB1P53618 MORF4L1P4-201ENST00000450245 976 ntBASIC6.24□□□□□ -1.41
COPB1P53618 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC6.24□□□□□ -1.41
COPB1P53618 AC083899.1-201ENST00000454465 3819 ntBASIC6.24□□□□□ -1.41
COPB1P53618 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC6.24□□□□□ -1.41
COPB1P53618 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC6.24□□□□□ -1.41
COPB1P53618 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.24□□□□□ -1.41
COPB1P53618 AC108751.3-201ENST00000461814 1020 ntBASIC6.24□□□□□ -1.41
COPB1P53618 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC6.24□□□□□ -1.41
COPB1P53618 RN7SL57P-201ENST00000493687 290 ntBASIC6.24□□□□□ -1.41
COPB1P53618 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.24□□□□□ -1.41
COPB1P53618 HAUS1P1-201ENST00000505275 832 ntBASIC6.24□□□□□ -1.41
COPB1P53618 GAPDHP71-201ENST00000511530 1003 ntBASIC6.24□□□□□ -1.41
COPB1P53618 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC6.24□□□□□ -1.41
COPB1P53618 AC027338.1-201ENST00000514840 825 ntBASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 159 ms