Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
CXCL12P48061 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CXCL12P48061 AC006511.3-201ENST00000624929 1783 ntBASIC5.5□□□□□ -1.53
CXCL12P48061 CCAT2-201ENST00000630920 1752 ntBASIC5.5□□□□□ -1.53
CXCL12P48061 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC5.49□□□□□ -1.53
CXCL12P48061 BRD7P6-201ENST00000431406 1860 ntBASIC5.49□□□□□ -1.53
CXCL12P48061 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CXCL12P48061 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
CXCL12P48061 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CXCL12P48061 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
CXCL12P48061 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CXCL12P48061 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CXCL12P48061 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
CXCL12P48061 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC5.49□□□□□ -1.53
CXCL12P48061 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.49□□□□□ -1.53
CXCL12P48061 AC010132.2-201ENST00000295493 1043 ntBASIC5.49□□□□□ -1.53
CXCL12P48061 SNORA51.8-201ENST00000384234 132 ntBASIC5.49□□□□□ -1.53
CXCL12P48061 CYB5AP4-201ENST00000396692 399 ntBASIC5.49□□□□□ -1.53
CXCL12P48061 RNA5SP487-201ENST00000410186 122 ntBASIC5.49□□□□□ -1.53
CXCL12P48061 CRIP1P1-201ENST00000427567 185 ntBASIC5.49□□□□□ -1.53
CXCL12P48061 AL360081.1-201ENST00000428299 555 ntBASIC5.49□□□□□ -1.53
CXCL12P48061 RPS3AP38-201ENST00000435889 763 ntBASIC5.49□□□□□ -1.53
CXCL12P48061 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.49□□□□□ -1.53
CXCL12P48061 RPL31P44-201ENST00000447680 377 ntBASIC5.49□□□□□ -1.53
CXCL12P48061 AL596266.1-201ENST00000448132 400 ntBASIC5.49□□□□□ -1.53
CXCL12P48061 RPS3AP53-201ENST00000454716 778 ntBASIC5.49□□□□□ -1.53
CXCL12P48061 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.49□□□□□ -1.53
CXCL12P48061 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.49□□□□□ -1.53
CXCL12P48061 RPS7P6-201ENST00000485777 579 ntBASIC5.49□□□□□ -1.53
CXCL12P48061 AC105233.1-201ENST00000498840 781 ntBASIC5.49□□□□□ -1.53
CXCL12P48061 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.49□□□□□ -1.53
CXCL12P48061 OR5AZ1P-201ENST00000527448 943 ntBASIC5.49□□□□□ -1.53
CXCL12P48061 PMS2P3-207ENST00000529061 717 ntBASIC5.49□□□□□ -1.53
CXCL12P48061 AC005000.1-201ENST00000536192 288 ntBASIC5.49□□□□□ -1.53
CXCL12P48061 AC139697.1-201ENST00000548429 745 ntBASIC5.49□□□□□ -1.53
CXCL12P48061 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.49□□□□□ -1.53
CXCL12P48061 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.49□□□□□ -1.53
CXCL12P48061 AC233699.1-201ENST00000569955 1168 ntBASIC5.49□□□□□ -1.53
CXCL12P48061 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC5.49□□□□□ -1.53
CXCL12P48061 AF230666.2-201ENST00000602328 725 ntBASIC5.49□□□□□ -1.53
CXCL12P48061 EIF3FP1-201ENST00000613970 806 ntBASIC5.49□□□□□ -1.53
CXCL12P48061 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC5.49□□□□□ -1.53
CXCL12P48061 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
CXCL12P48061 AC016251.2-201ENST00000623393 3089 ntBASIC5.49□□□□□ -1.53
CXCL12P48061 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.49□□□□□ -1.53
CXCL12P48061 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CXCL12P48061 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CXCL12P48061 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.49□□□□□ -1.53
CXCL12P48061 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
CXCL12P48061 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
CXCL12P48061 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.48□□□□□ -1.53
CXCL12P48061 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CXCL12P48061 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.48□□□□□ -1.53
CXCL12P48061 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CXCL12P48061 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CXCL12P48061 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.48□□□□□ -1.53
CXCL12P48061 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
CXCL12P48061 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CXCL12P48061 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CXCL12P48061 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CXCL12P48061 RNA5SP123-201ENST00000363244 119 ntBASIC5.48□□□□□ -1.53
CXCL12P48061 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.48□□□□□ -1.53
CXCL12P48061 RNF10P1-201ENST00000418589 369 ntBASIC5.48□□□□□ -1.53
CXCL12P48061 AC007161.1-204ENST00000423039 460 ntBASIC5.48□□□□□ -1.53
CXCL12P48061 AC245028.1-201ENST00000423259 256 ntBASIC5.48□□□□□ -1.53
CXCL12P48061 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC5.48□□□□□ -1.53
CXCL12P48061 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.48□□□□□ -1.53
CXCL12P48061 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.48□□□□□ -1.53
CXCL12P48061 AL451063.1-201ENST00000450164 1133 ntBASIC5.48□□□□□ -1.53
CXCL12P48061 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.48□□□□□ -1.53
CXCL12P48061 AC009127.1-201ENST00000467090 155 ntBASIC5.48□□□□□ -1.53
CXCL12P48061 AC093267.1-201ENST00000489176 961 ntBASIC5.48□□□□□ -1.53
CXCL12P48061 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.48□□□□□ -1.53
CXCL12P48061 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.48□□□□□ -1.53
CXCL12P48061 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.48□□□□□ -1.53
CXCL12P48061 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.48□□□□□ -1.53
CXCL12P48061 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.48□□□□□ -1.53
CXCL12P48061 AC004980.4-201ENST00000513375 203 ntBASIC5.48□□□□□ -1.53
CXCL12P48061 EIF3KP3-201ENST00000514461 639 ntBASIC5.48□□□□□ -1.53
CXCL12P48061 AC024940.3-201ENST00000538551 316 ntBASIC5.48□□□□□ -1.53
CXCL12P48061 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CXCL12P48061 AC079075.1-201ENST00000559543 878 ntBASIC5.48□□□□□ -1.53
CXCL12P48061 AC005341.1-201ENST00000571086 708 ntBASIC5.48□□□□□ -1.53
CXCL12P48061 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CXCL12P48061 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
CXCL12P48061 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC5.48□□□□□ -1.53
CXCL12P48061 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.48□□□□□ -1.53
CXCL12P48061 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC5.48□□□□□ -1.53
CXCL12P48061 AL596275.2-208ENST00000641192 594 ntBASIC5.48□□□□□ -1.53
CXCL12P48061 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.48□□□□□ -1.53
CXCL12P48061 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
CXCL12P48061 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CXCL12P48061 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC5.48□□□□□ -1.53
CXCL12P48061 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CXCL12P48061 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CXCL12P48061 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
CXCL12P48061 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.48□□□□□ -1.53
CXCL12P48061 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.48□□□□□ -1.53
CXCL12P48061 AL031651.1-201ENST00000615357 1438 ntBASIC5.48□□□□□ -1.53
CXCL12P48061 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms