Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.74□□□□□ -1.49
HLA-DPA1P20036 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.74□□□□□ -1.49
HLA-DPA1P20036 AC008521.2-201ENST00000591021 259 ntBASIC5.74□□□□□ -1.49
HLA-DPA1P20036 RN7SL544P-201ENST00000617232 284 ntBASIC5.74□□□□□ -1.49
HLA-DPA1P20036 RN7SL763P-201ENST00000620922 284 ntBASIC5.74□□□□□ -1.49
HLA-DPA1P20036 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
HLA-DPA1P20036 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HLA-DPA1P20036 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
HLA-DPA1P20036 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.74□□□□□ -1.49
HLA-DPA1P20036 AC079776.5-201ENST00000641920 211 ntBASIC5.74□□□□□ -1.49
HLA-DPA1P20036 AC091305.2-201ENST00000624049 1576 ntBASIC5.74□□□□□ -1.49
HLA-DPA1P20036 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.74□□□□□ -1.49
HLA-DPA1P20036 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.74□□□□□ -1.49
HLA-DPA1P20036 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
HLA-DPA1P20036 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HLA-DPA1P20036 GVINP1-202ENST00000531871 7271 ntBASIC5.74□□□□□ -1.49
HLA-DPA1P20036 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HLA-DPA1P20036 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.74□□□□□ -1.49
HLA-DPA1P20036 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
HLA-DPA1P20036 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HLA-DPA1P20036 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HLA-DPA1P20036 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.73□□□□□ -1.49
HLA-DPA1P20036 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
HLA-DPA1P20036 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
HLA-DPA1P20036 OR10AB1P-202ENST00000641219 1686 ntBASIC5.73□□□□□ -1.49
HLA-DPA1P20036 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
HLA-DPA1P20036 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HLA-DPA1P20036 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.73□□□□□ -1.49
HLA-DPA1P20036 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.73□□□□□ -1.49
HLA-DPA1P20036 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.73□□□□□ -1.49
HLA-DPA1P20036 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HLA-DPA1P20036 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.73□□□□□ -1.49
HLA-DPA1P20036 RNA5SP30-201ENST00000365552 115 ntBASIC5.73□□□□□ -1.49
HLA-DPA1P20036 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
HLA-DPA1P20036 AC087752.1-201ENST00000391360 558 ntBASIC5.73□□□□□ -1.49
HLA-DPA1P20036 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
HLA-DPA1P20036 AC002524.1-201ENST00000411687 547 ntBASIC5.73□□□□□ -1.49
HLA-DPA1P20036 NENFP1-201ENST00000419476 466 ntBASIC5.73□□□□□ -1.49
HLA-DPA1P20036 AC127526.2-201ENST00000426436 775 ntBASIC5.73□□□□□ -1.49
HLA-DPA1P20036 AL389925.1-201ENST00000432257 728 ntBASIC5.73□□□□□ -1.49
HLA-DPA1P20036 TMEM183AP1-205ENST00000432739 290 ntBASIC5.73□□□□□ -1.49
HLA-DPA1P20036 HMGB3P10-201ENST00000434734 572 ntBASIC5.73□□□□□ -1.49
HLA-DPA1P20036 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.73□□□□□ -1.49
HLA-DPA1P20036 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.73□□□□□ -1.49
HLA-DPA1P20036 REG1CP-206ENST00000447469 496 ntBASIC5.73□□□□□ -1.49
HLA-DPA1P20036 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.73□□□□□ -1.49
HLA-DPA1P20036 AC022336.1-201ENST00000475510 337 ntBASIC5.73□□□□□ -1.49
HLA-DPA1P20036 GAPDHP62-201ENST00000515313 990 ntBASIC5.73□□□□□ -1.49
HLA-DPA1P20036 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.73□□□□□ -1.49
HLA-DPA1P20036 AC137627.1-201ENST00000545761 289 ntBASIC5.73□□□□□ -1.49
HLA-DPA1P20036 AL049874.4-201ENST00000557593 255 ntBASIC5.73□□□□□ -1.49
HLA-DPA1P20036 DHFRP1-201ENST00000579682 559 ntBASIC5.73□□□□□ -1.49
HLA-DPA1P20036 AP001496.3-201ENST00000580230 913 ntBASIC5.73□□□□□ -1.49
HLA-DPA1P20036 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.73□□□□□ -1.49
HLA-DPA1P20036 AC015802.2-201ENST00000589690 189 ntBASIC5.73□□□□□ -1.49
HLA-DPA1P20036 AC009303.3-201ENST00000591103 736 ntBASIC5.73□□□□□ -1.49
HLA-DPA1P20036 AC063977.5-201ENST00000601044 974 ntBASIC5.73□□□□□ -1.49
HLA-DPA1P20036 AL353729.2-201ENST00000605859 1249 ntBASIC5.73□□□□□ -1.49
HLA-DPA1P20036 AL135786.2-201ENST00000608422 615 ntBASIC5.73□□□□□ -1.49
HLA-DPA1P20036 AC087565.3-203ENST00000641018 837 ntBASIC5.73□□□□□ -1.49
HLA-DPA1P20036 AL355488.2-201ENST00000609909 2850 ntBASIC5.73□□□□□ -1.49
HLA-DPA1P20036 AC011933.2-201ENST00000578539 2790 ntBASIC5.73□□□□□ -1.49
HLA-DPA1P20036 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HLA-DPA1P20036 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.73□□□□□ -1.49
HLA-DPA1P20036 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
HLA-DPA1P20036 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HLA-DPA1P20036 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
HLA-DPA1P20036 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.73□□□□□ -1.49
HLA-DPA1P20036 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.73□□□□□ -1.49
HLA-DPA1P20036 AC106872.5-201ENST00000508856 1416 ntBASIC5.73□□□□□ -1.49
HLA-DPA1P20036 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HLA-DPA1P20036 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
HLA-DPA1P20036 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.72□□□□□ -1.49
HLA-DPA1P20036 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-DPA1P20036 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
HLA-DPA1P20036 RLIMP2-201ENST00000427891 1563 ntBASIC5.72□□□□□ -1.49
HLA-DPA1P20036 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.72□□□□□ -1.49
HLA-DPA1P20036 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.72□□□□□ -1.49
HLA-DPA1P20036 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.72□□□□□ -1.49
HLA-DPA1P20036 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.72□□□□□ -1.49
HLA-DPA1P20036 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
HLA-DPA1P20036 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-DPA1P20036 AC004076.2-201ENST00000620532 3323 ntBASIC5.72□□□□□ -1.49
HLA-DPA1P20036 AC015689.2-201ENST00000528172 1738 ntBASIC5.72□□□□□ -1.49
HLA-DPA1P20036 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-DPA1P20036 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
HLA-DPA1P20036 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.72□□□□□ -1.49
HLA-DPA1P20036 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.72□□□□□ -1.49
HLA-DPA1P20036 MIR365B-201ENST00000362317 111 ntBASIC5.72□□□□□ -1.49
HLA-DPA1P20036 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-DPA1P20036 RNA5SP284-201ENST00000384547 118 ntBASIC5.72□□□□□ -1.49
HLA-DPA1P20036 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.72□□□□□ -1.49
HLA-DPA1P20036 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.72□□□□□ -1.49
HLA-DPA1P20036 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.72□□□□□ -1.49
HLA-DPA1P20036 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.72□□□□□ -1.49
HLA-DPA1P20036 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.72□□□□□ -1.49
HLA-DPA1P20036 HMGB3P24-201ENST00000433260 622 ntBASIC5.72□□□□□ -1.49
HLA-DPA1P20036 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-DPA1P20036 AL445665.1-202ENST00000452436 324 ntBASIC5.72□□□□□ -1.49
HLA-DPA1P20036 AL358876.1-201ENST00000453364 1075 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms