Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CTPS1P17812 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CTPS1P17812 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CTPS1P17812 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.79□□□□□ -1.48
CTPS1P17812 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CTPS1P17812 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
CTPS1P17812 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CTPS1P17812 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
CTPS1P17812 AL159987.1-201ENST00000347911 293 ntBASIC5.79□□□□□ -1.48
CTPS1P17812 MIR375-201ENST00000362103 64 ntBASIC5.79□□□□□ -1.48
CTPS1P17812 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
CTPS1P17812 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CTPS1P17812 HMGB1P20-201ENST00000402555 677 ntBASIC5.79□□□□□ -1.48
CTPS1P17812 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.79□□□□□ -1.48
CTPS1P17812 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.79□□□□□ -1.48
CTPS1P17812 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.79□□□□□ -1.48
CTPS1P17812 AC019205.1-201ENST00000421830 730 ntBASIC5.79□□□□□ -1.48
CTPS1P17812 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.79□□□□□ -1.48
CTPS1P17812 MTCO1P51-201ENST00000427672 1060 ntBASIC5.79□□□□□ -1.48
CTPS1P17812 BX119321.1-201ENST00000428912 797 ntBASIC5.79□□□□□ -1.48
CTPS1P17812 AC073410.1-201ENST00000435125 589 ntBASIC5.79□□□□□ -1.48
CTPS1P17812 TXNP2-201ENST00000443918 295 ntBASIC5.79□□□□□ -1.48
CTPS1P17812 ZNF736P6Y-201ENST00000447526 1213 ntBASIC5.79□□□□□ -1.48
CTPS1P17812 snoU13.29-201ENST00000459370 104 ntBASIC5.79□□□□□ -1.48
CTPS1P17812 RPS23P6-201ENST00000466136 431 ntBASIC5.79□□□□□ -1.48
CTPS1P17812 AC007998.1-201ENST00000474156 672 ntBASIC5.79□□□□□ -1.48
CTPS1P17812 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC5.79□□□□□ -1.48
CTPS1P17812 AC009120.1-201ENST00000493458 473 ntBASIC5.79□□□□□ -1.48
CTPS1P17812 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.79□□□□□ -1.48
CTPS1P17812 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.79□□□□□ -1.48
CTPS1P17812 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.79□□□□□ -1.48
CTPS1P17812 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.79□□□□□ -1.48
CTPS1P17812 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.79□□□□□ -1.48
CTPS1P17812 AC079600.1-201ENST00000550326 297 ntBASIC5.79□□□□□ -1.48
CTPS1P17812 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.79□□□□□ -1.48
CTPS1P17812 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.79□□□□□ -1.48
CTPS1P17812 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.79□□□□□ -1.48
CTPS1P17812 NPM1P42-201ENST00000560329 862 ntBASIC5.79□□□□□ -1.48
CTPS1P17812 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
CTPS1P17812 MIR4260-201ENST00000583107 67 ntBASIC5.79□□□□□ -1.48
CTPS1P17812 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.79□□□□□ -1.48
CTPS1P17812 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.79□□□□□ -1.48
CTPS1P17812 AL391001.1-201ENST00000602747 715 ntBASIC5.79□□□□□ -1.48
CTPS1P17812 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.79□□□□□ -1.48
CTPS1P17812 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.79□□□□□ -1.48
CTPS1P17812 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.79□□□□□ -1.48
CTPS1P17812 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.79□□□□□ -1.48
CTPS1P17812 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.79□□□□□ -1.48
CTPS1P17812 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CTPS1P17812 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CTPS1P17812 AC007842.1-201ENST00000597336 2039 ntBASIC5.79□□□□□ -1.48
CTPS1P17812 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.79□□□□□ -1.48
CTPS1P17812 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CTPS1P17812 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CTPS1P17812 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
CTPS1P17812 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CTPS1P17812 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CTPS1P17812 GTF2IP4-201ENST00000453092 2054 ntBASIC5.78□□□□□ -1.48
CTPS1P17812 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
CTPS1P17812 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CTPS1P17812 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CTPS1P17812 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CTPS1P17812 SNORA64.1-201ENST00000362600 132 ntBASIC5.78□□□□□ -1.48
CTPS1P17812 RN7SKP186-201ENST00000365371 303 ntBASIC5.78□□□□□ -1.48
CTPS1P17812 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
CTPS1P17812 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CTPS1P17812 RNA5SP284-201ENST00000384547 118 ntBASIC5.78□□□□□ -1.48
CTPS1P17812 RNU11-201ENST00000387069 134 ntBASIC5.78□□□□□ -1.48
CTPS1P17812 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.78□□□□□ -1.48
CTPS1P17812 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC5.78□□□□□ -1.48
CTPS1P17812 MTND2P9-201ENST00000422293 931 ntBASIC5.78□□□□□ -1.48
CTPS1P17812 AL034379.1-201ENST00000423216 253 ntBASIC5.78□□□□□ -1.48
CTPS1P17812 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CTPS1P17812 SCAND3P1-201ENST00000439854 1060 ntBASIC5.78□□□□□ -1.48
CTPS1P17812 RPL12P11-201ENST00000439970 501 ntBASIC5.78□□□□□ -1.48
CTPS1P17812 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.78□□□□□ -1.48
CTPS1P17812 OR7E116P-201ENST00000448529 957 ntBASIC5.78□□□□□ -1.48
CTPS1P17812 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.78□□□□□ -1.48
CTPS1P17812 AL445665.1-202ENST00000452436 324 ntBASIC5.78□□□□□ -1.48
CTPS1P17812 RSU1P1-201ENST00000453416 441 ntBASIC5.78□□□□□ -1.48
CTPS1P17812 MTND2P30-201ENST00000456663 382 ntBASIC5.78□□□□□ -1.48
CTPS1P17812 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.78□□□□□ -1.48
CTPS1P17812 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CTPS1P17812 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC5.78□□□□□ -1.48
CTPS1P17812 DUTP1-201ENST00000493631 470 ntBASIC5.78□□□□□ -1.48
CTPS1P17812 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.78□□□□□ -1.48
CTPS1P17812 AC021678.3-201ENST00000517893 476 ntBASIC5.78□□□□□ -1.48
CTPS1P17812 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.78□□□□□ -1.48
CTPS1P17812 AC015689.2-201ENST00000528172 1738 ntBASIC5.78□□□□□ -1.48
CTPS1P17812 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.78□□□□□ -1.48
CTPS1P17812 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.78□□□□□ -1.48
CTPS1P17812 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.78□□□□□ -1.48
CTPS1P17812 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.78□□□□□ -1.48
CTPS1P17812 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.78□□□□□ -1.48
CTPS1P17812 MIR3614-201ENST00000581261 86 ntBASIC5.78□□□□□ -1.48
CTPS1P17812 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.78□□□□□ -1.48
CTPS1P17812 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CTPS1P17812 AL513327.3-201ENST00000602618 469 ntBASIC5.78□□□□□ -1.48
CTPS1P17812 AL360012.1-201ENST00000602813 131 ntBASIC5.78□□□□□ -1.48
CTPS1P17812 AL671309.1-201ENST00000603750 544 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms