Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.07□□□□□ -1.44
COL11A1P12107 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL11A1P12107 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.07□□□□□ -1.44
COL11A1P12107 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
COL11A1P12107 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.07□□□□□ -1.44
COL11A1P12107 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
COL11A1P12107 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
COL11A1P12107 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL11A1P12107 Z95114.1-201ENST00000624264 14574 ntBASIC6.07□□□□□ -1.44
COL11A1P12107 RNU4-2-201ENST00000365668 141 ntBASIC6.07□□□□□ -1.44
COL11A1P12107 GNG5P2-201ENST00000372054 207 ntBASIC6.07□□□□□ -1.44
COL11A1P12107 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
COL11A1P12107 AL645733.1-201ENST00000402250 217 ntBASIC6.07□□□□□ -1.44
COL11A1P12107 PPIAP9-201ENST00000403866 498 ntBASIC6.07□□□□□ -1.44
COL11A1P12107 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.07□□□□□ -1.44
COL11A1P12107 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC6.07□□□□□ -1.44
COL11A1P12107 CBX1P2-201ENST00000453841 458 ntBASIC6.07□□□□□ -1.44
COL11A1P12107 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC6.07□□□□□ -1.44
COL11A1P12107 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.07□□□□□ -1.44
COL11A1P12107 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC6.07□□□□□ -1.44
COL11A1P12107 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.07□□□□□ -1.44
COL11A1P12107 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC6.07□□□□□ -1.44
COL11A1P12107 AL133406.3-201ENST00000606817 541 ntBASIC6.07□□□□□ -1.44
COL11A1P12107 AP000550.3-201ENST00000637734 379 ntBASIC6.07□□□□□ -1.44
COL11A1P12107 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL11A1P12107 IRF5P1-201ENST00000504852 2164 ntBASIC6.07□□□□□ -1.44
COL11A1P12107 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL11A1P12107 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL11A1P12107 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL11A1P12107 ZNF733P-202ENST00000444809 1573 ntBASIC6.07□□□□□ -1.44
COL11A1P12107 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL11A1P12107 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
COL11A1P12107 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL11A1P12107 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.07□□□□□ -1.44
COL11A1P12107 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL11A1P12107 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.06□□□□□ -1.44
COL11A1P12107 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
COL11A1P12107 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
COL11A1P12107 RNF10P1-201ENST00000418589 369 ntBASIC6.06□□□□□ -1.44
COL11A1P12107 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC6.06□□□□□ -1.44
COL11A1P12107 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC6.06□□□□□ -1.44
COL11A1P12107 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC6.06□□□□□ -1.44
COL11A1P12107 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC6.06□□□□□ -1.44
COL11A1P12107 AC105233.1-201ENST00000498840 781 ntBASIC6.06□□□□□ -1.44
COL11A1P12107 AC021006.3-201ENST00000530771 192 ntBASIC6.06□□□□□ -1.44
COL11A1P12107 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC6.06□□□□□ -1.44
COL11A1P12107 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC6.06□□□□□ -1.44
COL11A1P12107 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC6.06□□□□□ -1.44
COL11A1P12107 AC009597.2-201ENST00000604659 592 ntBASIC6.06□□□□□ -1.44
COL11A1P12107 FAM25E-202ENST00000608562 189 ntBASIC6.06□□□□□ -1.44
COL11A1P12107 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC6.06□□□□□ -1.44
COL11A1P12107 AP003400.3-201ENST00000624904 346 ntBASIC6.06□□□□□ -1.44
COL11A1P12107 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL11A1P12107 CASC19-221ENST00000641309 1382 ntBASIC6.06□□□□□ -1.44
COL11A1P12107 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COL11A1P12107 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.06□□□□□ -1.44
COL11A1P12107 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
COL11A1P12107 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COL11A1P12107 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.06□□□□□ -1.44
COL11A1P12107 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC6.06□□□□□ -1.44
COL11A1P12107 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC6.06□□□□□ -1.44
COL11A1P12107 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.06□□□□□ -1.44
COL11A1P12107 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL11A1P12107 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL11A1P12107 AL353625.1-202ENST00000366273 571 ntBASIC6.06□□□□□ -1.44
COL11A1P12107 RNU4-64P-201ENST00000410795 131 ntBASIC6.06□□□□□ -1.44
COL11A1P12107 AC104837.2-201ENST00000427236 424 ntBASIC6.06□□□□□ -1.44
COL11A1P12107 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC6.06□□□□□ -1.44
COL11A1P12107 BX679664.2-201ENST00000439282 283 ntBASIC6.06□□□□□ -1.44
COL11A1P12107 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC6.06□□□□□ -1.44
COL11A1P12107 AC092647.3-201ENST00000443044 633 ntBASIC6.06□□□□□ -1.44
COL11A1P12107 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.06□□□□□ -1.44
COL11A1P12107 RN7SL814P-201ENST00000487715 300 ntBASIC6.06□□□□□ -1.44
COL11A1P12107 AC091912.1-201ENST00000511351 248 ntBASIC6.06□□□□□ -1.44
COL11A1P12107 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL11A1P12107 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL11A1P12107 AL627230.1-201ENST00000613077 211 ntBASIC6.06□□□□□ -1.44
COL11A1P12107 AL356752.1-201ENST00000615844 593 ntBASIC6.06□□□□□ -1.44
COL11A1P12107 NAA60-237ENST00000615865 326 ntTSL 5 BASIC6.06□□□□□ -1.44
COL11A1P12107 AL591926.8-201ENST00000616876 211 ntBASIC6.06□□□□□ -1.44
COL11A1P12107 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC6.06□□□□□ -1.44
COL11A1P12107 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL11A1P12107 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC6.05□□□□□ -1.44
COL11A1P12107 UGT2B24P-201ENST00000514441 1597 ntBASIC6.05□□□□□ -1.44
COL11A1P12107 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
COL11A1P12107 KYNUP3-201ENST00000574386 1341 ntBASIC6.05□□□□□ -1.44
COL11A1P12107 RNVU1-6-201ENST00000364688 164 ntBASIC6.05□□□□□ -1.44
COL11A1P12107 AL035419.1-201ENST00000397037 564 ntBASIC6.05□□□□□ -1.44
COL11A1P12107 HSPA8P15-201ENST00000401676 786 ntBASIC6.05□□□□□ -1.44
COL11A1P12107 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC6.05□□□□□ -1.44
COL11A1P12107 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC6.05□□□□□ -1.44
COL11A1P12107 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC6.05□□□□□ -1.44
COL11A1P12107 AC137768.1-201ENST00000549998 553 ntBASIC6.05□□□□□ -1.44
COL11A1P12107 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC6.05□□□□□ -1.44
COL11A1P12107 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC6.05□□□□□ -1.44
COL11A1P12107 ZNRD1ASP-221ENST00000637794 1074 ntBASIC6.05□□□□□ -1.44
COL11A1P12107 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
COL11A1P12107 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
COL11A1P12107 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC6.05□□□□□ -1.44
COL11A1P12107 AC114774.1-201ENST00000507410 1770 ntBASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms