Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
MMP3P08254 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
MMP3P08254 AC007938.2-201ENST00000604666 2634 ntBASIC6.21□□□□□ -1.42
MMP3P08254 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.21□□□□□ -1.42
MMP3P08254 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.21□□□□□ -1.42
MMP3P08254 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
MMP3P08254 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
MMP3P08254 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
MMP3P08254 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.21□□□□□ -1.42
MMP3P08254 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.2□□□□□ -1.42
MMP3P08254 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.2□□□□□ -1.42
MMP3P08254 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
MMP3P08254 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.2□□□□□ -1.42
MMP3P08254 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
MMP3P08254 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
MMP3P08254 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
MMP3P08254 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
MMP3P08254 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
MMP3P08254 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
MMP3P08254 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.2□□□□□ -1.42
MMP3P08254 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
MMP3P08254 RNA5SP514-201ENST00000363717 111 ntBASIC6.2□□□□□ -1.42
MMP3P08254 RNU6-891P-201ENST00000384280 111 ntBASIC6.2□□□□□ -1.42
MMP3P08254 RNA5SP339-201ENST00000390987 122 ntBASIC6.2□□□□□ -1.42
MMP3P08254 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC6.2□□□□□ -1.42
MMP3P08254 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC6.2□□□□□ -1.42
MMP3P08254 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC6.2□□□□□ -1.42
MMP3P08254 NPM1P25-201ENST00000429734 854 ntBASIC6.2□□□□□ -1.42
MMP3P08254 NPM1P48-201ENST00000436002 853 ntBASIC6.2□□□□□ -1.42
MMP3P08254 AC114878.1-201ENST00000441166 358 ntBASIC6.2□□□□□ -1.42
MMP3P08254 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC6.2□□□□□ -1.42
MMP3P08254 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC6.2□□□□□ -1.42
MMP3P08254 RN7SL329P-201ENST00000467740 299 ntBASIC6.2□□□□□ -1.42
MMP3P08254 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC6.2□□□□□ -1.42
MMP3P08254 RPL15P21-201ENST00000495592 567 ntBASIC6.2□□□□□ -1.42
MMP3P08254 RN7SL808P-201ENST00000496066 299 ntBASIC6.2□□□□□ -1.42
MMP3P08254 snoU109.5-201ENST00000516231 132 ntBASIC6.2□□□□□ -1.42
MMP3P08254 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
MMP3P08254 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC6.2□□□□□ -1.42
MMP3P08254 OR4A46P-201ENST00000527255 933 ntBASIC6.2□□□□□ -1.42
MMP3P08254 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC6.2□□□□□ -1.42
MMP3P08254 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC6.2□□□□□ -1.42
MMP3P08254 HMGN2P6-201ENST00000551091 273 ntBASIC6.2□□□□□ -1.42
MMP3P08254 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC6.2□□□□□ -1.42
MMP3P08254 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC6.2□□□□□ -1.42
MMP3P08254 AC093524.1-201ENST00000564266 1094 ntBASIC6.2□□□□□ -1.42
MMP3P08254 DHFRP1-201ENST00000579682 559 ntBASIC6.2□□□□□ -1.42
MMP3P08254 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.2□□□□□ -1.42
MMP3P08254 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.2□□□□□ -1.42
MMP3P08254 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.2□□□□□ -1.42
MMP3P08254 AL121612.2-201ENST00000612261 482 ntBASIC6.2□□□□□ -1.42
MMP3P08254 AL139407.1-201ENST00000613826 1175 ntBASIC6.2□□□□□ -1.42
MMP3P08254 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC6.2□□□□□ -1.42
MMP3P08254 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
MMP3P08254 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
MMP3P08254 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
MMP3P08254 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.2□□□□□ -1.42
MMP3P08254 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
MMP3P08254 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
MMP3P08254 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
MMP3P08254 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.2□□□□□ -1.42
MMP3P08254 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
MMP3P08254 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
MMP3P08254 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6.2□□□□□ -1.42
MMP3P08254 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
MMP3P08254 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
MMP3P08254 HSPD1P8-201ENST00000400121 1658 ntBASIC6.2□□□□□ -1.42
MMP3P08254 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
MMP3P08254 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
MMP3P08254 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
MMP3P08254 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
MMP3P08254 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
MMP3P08254 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
MMP3P08254 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
MMP3P08254 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
MMP3P08254 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
MMP3P08254 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
MMP3P08254 U8.4-201ENST00000363626 134 ntBASIC6.19□□□□□ -1.42
MMP3P08254 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
MMP3P08254 AL009179.1-201ENST00000406085 265 ntBASIC6.19□□□□□ -1.42
MMP3P08254 AL356806.1-201ENST00000422524 916 ntBASIC6.19□□□□□ -1.42
MMP3P08254 PRUNEP1-201ENST00000425846 705 ntBASIC6.19□□□□□ -1.42
MMP3P08254 EIF2S2P3-201ENST00000428356 999 ntBASIC6.19□□□□□ -1.42
MMP3P08254 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC6.19□□□□□ -1.42
MMP3P08254 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC6.19□□□□□ -1.42
MMP3P08254 RSU1P1-201ENST00000453416 441 ntBASIC6.19□□□□□ -1.42
MMP3P08254 AL035090.1-201ENST00000454835 332 ntBASIC6.19□□□□□ -1.42
MMP3P08254 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC6.19□□□□□ -1.42
MMP3P08254 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
MMP3P08254 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC6.19□□□□□ -1.42
MMP3P08254 AC231760.1-201ENST00000498002 260 ntBASIC6.19□□□□□ -1.42
MMP3P08254 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC6.19□□□□□ -1.42
MMP3P08254 AC026688.1-201ENST00000520639 1168 ntBASIC6.19□□□□□ -1.42
MMP3P08254 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.19□□□□□ -1.42
MMP3P08254 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.19□□□□□ -1.42
MMP3P08254 AC006518.1-201ENST00000541449 943 ntBASIC6.19□□□□□ -1.42
MMP3P08254 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC6.19□□□□□ -1.42
MMP3P08254 HIRAP1-201ENST00000605318 787 ntBASIC6.19□□□□□ -1.42
MMP3P08254 AL133481.2-203ENST00000607558 139 ntBASIC6.19□□□□□ -1.42
MMP3P08254 AC126915.2-201ENST00000610957 190 ntBASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 197.1 ms