Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC6.42□□□□□ -1.38
COL4A1P02462 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC6.42□□□□□ -1.38
COL4A1P02462 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC6.42□□□□□ -1.38
COL4A1P02462 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC6.42□□□□□ -1.38
COL4A1P02462 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC6.42□□□□□ -1.38
COL4A1P02462 AC068790.7-201ENST00000602347 528 ntBASIC6.42□□□□□ -1.38
COL4A1P02462 AC087283.1-201ENST00000604029 1074 ntBASIC6.42□□□□□ -1.38
COL4A1P02462 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC6.42□□□□□ -1.38
COL4A1P02462 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL4A1P02462 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.42□□□□□ -1.38
COL4A1P02462 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.42□□□□□ -1.38
COL4A1P02462 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COL4A1P02462 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL4A1P02462 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC6.41□□□□□ -1.38
COL4A1P02462 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
COL4A1P02462 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.41□□□□□ -1.38
COL4A1P02462 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COL4A1P02462 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL4A1P02462 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC6.41□□□□□ -1.38
COL4A1P02462 AL008638.3-201ENST00000623027 5182 ntBASIC6.41□□□□□ -1.38
COL4A1P02462 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.41□□□□□ -1.38
COL4A1P02462 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COL4A1P02462 RN7SKP149-201ENST00000363008 344 ntBASIC6.41□□□□□ -1.38
COL4A1P02462 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COL4A1P02462 AL035419.1-201ENST00000397037 564 ntBASIC6.41□□□□□ -1.38
COL4A1P02462 AL078599.1-201ENST00000402075 293 ntBASIC6.41□□□□□ -1.38
COL4A1P02462 NDUFA5P8-201ENST00000449019 346 ntBASIC6.41□□□□□ -1.38
COL4A1P02462 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.41□□□□□ -1.38
COL4A1P02462 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC6.41□□□□□ -1.38
COL4A1P02462 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC6.41□□□□□ -1.38
COL4A1P02462 GLUD1P3-202ENST00000508551 200 ntBASIC6.41□□□□□ -1.38
COL4A1P02462 AC063949.1-201ENST00000552900 865 ntBASIC6.41□□□□□ -1.38
COL4A1P02462 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.41□□□□□ -1.38
COL4A1P02462 AC068790.4-201ENST00000602474 263 ntBASIC6.41□□□□□ -1.38
COL4A1P02462 AC011453.2-201ENST00000603737 729 ntBASIC6.41□□□□□ -1.38
COL4A1P02462 AC009027.1-201ENST00000604510 479 ntBASIC6.41□□□□□ -1.38
COL4A1P02462 AC005252.1-201ENST00000604518 1063 ntBASIC6.41□□□□□ -1.38
COL4A1P02462 AC073575.2-201ENST00000614212 627 ntBASIC6.41□□□□□ -1.38
COL4A1P02462 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC6.41□□□□□ -1.38
COL4A1P02462 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC6.41□□□□□ -1.38
COL4A1P02462 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.41□□□□□ -1.38
COL4A1P02462 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC6.41□□□□□ -1.38
COL4A1P02462 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC6.41□□□□□ -1.38
COL4A1P02462 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL4A1P02462 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
COL4A1P02462 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
COL4A1P02462 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
COL4A1P02462 HYDIN2-203ENST00000614586 13885 ntBASIC6.4□□□□□ -1.38
COL4A1P02462 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.4□□□□□ -1.38
COL4A1P02462 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
COL4A1P02462 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
COL4A1P02462 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
COL4A1P02462 MFSD4BP1-201ENST00000513330 1552 ntBASIC6.4□□□□□ -1.38
COL4A1P02462 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
COL4A1P02462 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
COL4A1P02462 RPL11P3-201ENST00000395256 523 ntBASIC6.4□□□□□ -1.38
COL4A1P02462 AC013442.1-201ENST00000397347 228 ntBASIC6.4□□□□□ -1.38
COL4A1P02462 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
COL4A1P02462 KNOP1P3-201ENST00000446933 426 ntBASIC6.4□□□□□ -1.38
COL4A1P02462 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC6.4□□□□□ -1.38
COL4A1P02462 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC6.4□□□□□ -1.38
COL4A1P02462 RPS29P22-201ENST00000472363 168 ntBASIC6.4□□□□□ -1.38
COL4A1P02462 RPL5P22-201ENST00000480199 884 ntBASIC6.4□□□□□ -1.38
COL4A1P02462 RPL7P41-201ENST00000485823 957 ntBASIC6.4□□□□□ -1.38
COL4A1P02462 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.4□□□□□ -1.38
COL4A1P02462 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC6.4□□□□□ -1.38
COL4A1P02462 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC6.4□□□□□ -1.38
COL4A1P02462 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC6.4□□□□□ -1.38
COL4A1P02462 NOP10-202ENST00000557912 436 ntTSL 2 BASIC6.4□□□□□ -1.38
COL4A1P02462 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC6.4□□□□□ -1.38
COL4A1P02462 AC069542.2-201ENST00000624816 216 ntBASIC6.4□□□□□ -1.38
COL4A1P02462 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
COL4A1P02462 LRRC37A9P-201ENST00000603850 5376 ntBASIC6.4□□□□□ -1.39
COL4A1P02462 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.4□□□□□ -1.39
COL4A1P02462 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
COL4A1P02462 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
COL4A1P02462 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC6.39□□□□□ -1.39
COL4A1P02462 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
COL4A1P02462 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
COL4A1P02462 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.39□□□□□ -1.39
COL4A1P02462 AC004074.1-201ENST00000421810 1063 ntBASIC6.39□□□□□ -1.39
COL4A1P02462 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
COL4A1P02462 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.39□□□□□ -1.39
COL4A1P02462 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC6.39□□□□□ -1.39
COL4A1P02462 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC6.39□□□□□ -1.39
COL4A1P02462 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.39□□□□□ -1.39
COL4A1P02462 UBE2Q2P10-201ENST00000514854 900 ntBASIC6.39□□□□□ -1.39
COL4A1P02462 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.39□□□□□ -1.39
COL4A1P02462 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC6.39□□□□□ -1.39
COL4A1P02462 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC6.39□□□□□ -1.39
COL4A1P02462 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC6.39□□□□□ -1.39
COL4A1P02462 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.39□□□□□ -1.39
COL4A1P02462 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL4A1P02462 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
COL4A1P02462 SSPO-201ENST00000378016 15589 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
COL4A1P02462 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL4A1P02462 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL4A1P02462 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL4A1P02462 AP004289.1-201ENST00000436307 2205 ntBASIC6.39□□□□□ -1.39
COL4A1P02462 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms