Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL2A1P02458 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.36□□□□□ -1.39
COL2A1P02458 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
COL2A1P02458 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COL2A1P02458 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COL2A1P02458 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.35□□□□□ -1.39
COL2A1P02458 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL2A1P02458 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL2A1P02458 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL2A1P02458 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL2A1P02458 RNVU1-6-201ENST00000364688 164 ntBASIC6.35□□□□□ -1.39
COL2A1P02458 AC013442.1-201ENST00000397347 228 ntBASIC6.35□□□□□ -1.39
COL2A1P02458 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC6.35□□□□□ -1.39
COL2A1P02458 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.35□□□□□ -1.39
COL2A1P02458 EIF4EBP2P1-201ENST00000450009 343 ntBASIC6.35□□□□□ -1.39
COL2A1P02458 AL356981.1-201ENST00000454879 684 ntBASIC6.35□□□□□ -1.39
COL2A1P02458 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC6.35□□□□□ -1.39
COL2A1P02458 RN7SL423P-201ENST00000486202 304 ntBASIC6.35□□□□□ -1.39
COL2A1P02458 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC6.35□□□□□ -1.39
COL2A1P02458 RNU6ATAC24P-201ENST00000516811 135 ntBASIC6.35□□□□□ -1.39
COL2A1P02458 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC6.35□□□□□ -1.39
COL2A1P02458 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
COL2A1P02458 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC6.35□□□□□ -1.39
COL2A1P02458 AC091953.3-201ENST00000623220 236 ntBASIC6.35□□□□□ -1.39
COL2A1P02458 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
COL2A1P02458 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL2A1P02458 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
COL2A1P02458 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL2A1P02458 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
COL2A1P02458 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL2A1P02458 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
COL2A1P02458 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL2A1P02458 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC6.35□□□□□ -1.39
COL2A1P02458 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL2A1P02458 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COL2A1P02458 CYB5AP4-201ENST00000396692 399 ntBASIC6.34□□□□□ -1.39
COL2A1P02458 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC6.34□□□□□ -1.39
COL2A1P02458 PA2G4P6-201ENST00000438325 1197 ntBASIC6.34□□□□□ -1.39
COL2A1P02458 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.34□□□□□ -1.39
COL2A1P02458 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC6.34□□□□□ -1.39
COL2A1P02458 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC6.34□□□□□ -1.39
COL2A1P02458 AC092754.1-201ENST00000472975 479 ntBASIC6.34□□□□□ -1.39
COL2A1P02458 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.34□□□□□ -1.39
COL2A1P02458 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC6.34□□□□□ -1.39
COL2A1P02458 AC011840.5-201ENST00000582125 771 ntBASIC6.34□□□□□ -1.39
COL2A1P02458 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC6.34□□□□□ -1.39
COL2A1P02458 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.34□□□□□ -1.39
COL2A1P02458 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL2A1P02458 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COL2A1P02458 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COL2A1P02458 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL2A1P02458 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL2A1P02458 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
COL2A1P02458 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COL2A1P02458 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
COL2A1P02458 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COL2A1P02458 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC6.34□□□□□ -1.39
COL2A1P02458 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.34□□□□□ -1.39
COL2A1P02458 AC068870.1-201ENST00000563737 2455 ntBASIC6.34□□□□□ -1.4
COL2A1P02458 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.34□□□□□ -1.4
COL2A1P02458 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.4
COL2A1P02458 SSR1P1-201ENST00000407630 814 ntBASIC6.34□□□□□ -1.4
COL2A1P02458 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC6.34□□□□□ -1.4
COL2A1P02458 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC6.34□□□□□ -1.4
COL2A1P02458 DDX39BP1-205ENST00000422507 192 ntBASIC6.34□□□□□ -1.4
COL2A1P02458 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC6.34□□□□□ -1.4
COL2A1P02458 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC6.34□□□□□ -1.4
COL2A1P02458 AC079168.1-201ENST00000458741 345 ntBASIC6.34□□□□□ -1.4
COL2A1P02458 AC091153.1-201ENST00000466297 402 ntBASIC6.34□□□□□ -1.4
COL2A1P02458 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.34□□□□□ -1.4
COL2A1P02458 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC6.34□□□□□ -1.4
COL2A1P02458 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.34□□□□□ -1.4
COL2A1P02458 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.4
COL2A1P02458 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
COL2A1P02458 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.4
COL2A1P02458 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COL2A1P02458 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.33□□□□□ -1.4
COL2A1P02458 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL2A1P02458 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL2A1P02458 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC6.33□□□□□ -1.4
COL2A1P02458 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COL2A1P02458 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL2A1P02458 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL2A1P02458 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COL2A1P02458 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC6.33□□□□□ -1.4
COL2A1P02458 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.33□□□□□ -1.4
COL2A1P02458 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC6.33□□□□□ -1.4
COL2A1P02458 NUDT19P3-201ENST00000404698 555 ntBASIC6.33□□□□□ -1.4
COL2A1P02458 RNU6ATAC7P-201ENST00000408111 127 ntBASIC6.33□□□□□ -1.4
COL2A1P02458 RN7SKP126-201ENST00000411143 300 ntBASIC6.33□□□□□ -1.4
COL2A1P02458 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC6.33□□□□□ -1.4
COL2A1P02458 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC6.33□□□□□ -1.4
COL2A1P02458 AC006466.1-201ENST00000438721 289 ntBASIC6.33□□□□□ -1.4
COL2A1P02458 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC6.33□□□□□ -1.4
COL2A1P02458 CEACAMP9-201ENST00000442990 513 ntBASIC6.33□□□□□ -1.4
COL2A1P02458 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COL2A1P02458 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC6.33□□□□□ -1.4
COL2A1P02458 AC104634.1-201ENST00000452720 462 ntBASIC6.33□□□□□ -1.4
COL2A1P02458 AC009963.2-201ENST00000453431 138 ntBASIC6.33□□□□□ -1.4
COL2A1P02458 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 143.4 ms