Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 TEX41-254ENST00000626394 423 ntTSL 5 BASIC6.52□□□□□ -1.37
COL1A1P02452 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
COL1A1P02452 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
COL1A1P02452 OR9K1P-202ENST00000641111 3217 ntBASIC6.52□□□□□ -1.37
COL1A1P02452 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.52□□□□□ -1.37
COL1A1P02452 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
COL1A1P02452 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL1A1P02452 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL1A1P02452 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
COL1A1P02452 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL1A1P02452 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.51□□□□□ -1.37
COL1A1P02452 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL1A1P02452 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL1A1P02452 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL1A1P02452 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.51□□□□□ -1.37
COL1A1P02452 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC6.51□□□□□ -1.37
COL1A1P02452 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
COL1A1P02452 AC078842.2-201ENST00000447529 1835 ntTSL 2 BASIC6.51□□□□□ -1.37
COL1A1P02452 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL1A1P02452 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC6.51□□□□□ -1.37
COL1A1P02452 RN7SKP103-201ENST00000363848 320 ntBASIC6.51□□□□□ -1.37
COL1A1P02452 SNORA11-201ENST00000408789 128 ntBASIC6.51□□□□□ -1.37
COL1A1P02452 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC6.51□□□□□ -1.37
COL1A1P02452 AC006466.1-201ENST00000438721 289 ntBASIC6.51□□□□□ -1.37
COL1A1P02452 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC6.51□□□□□ -1.37
COL1A1P02452 RPL21P133-201ENST00000443666 476 ntBASIC6.51□□□□□ -1.37
COL1A1P02452 AL451063.1-201ENST00000450164 1133 ntBASIC6.51□□□□□ -1.37
COL1A1P02452 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
COL1A1P02452 snoU13.29-201ENST00000459370 104 ntBASIC6.51□□□□□ -1.37
COL1A1P02452 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC6.51□□□□□ -1.37
COL1A1P02452 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC6.51□□□□□ -1.37
COL1A1P02452 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
COL1A1P02452 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC6.51□□□□□ -1.37
COL1A1P02452 OR4A43P-201ENST00000532938 908 ntBASIC6.51□□□□□ -1.37
COL1A1P02452 PCNPP1-201ENST00000552501 511 ntBASIC6.51□□□□□ -1.37
COL1A1P02452 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC6.51□□□□□ -1.37
COL1A1P02452 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC6.51□□□□□ -1.37
COL1A1P02452 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC6.51□□□□□ -1.37
COL1A1P02452 PRELID3BP3-201ENST00000584963 545 ntBASIC6.51□□□□□ -1.37
COL1A1P02452 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC6.51□□□□□ -1.37
COL1A1P02452 AC021422.1-201ENST00000621212 473 ntBASIC6.51□□□□□ -1.37
COL1A1P02452 AC002090.1-201ENST00000625000 2138 ntBASIC6.51□□□□□ -1.37
COL1A1P02452 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.51□□□□□ -1.37
COL1A1P02452 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
COL1A1P02452 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL1A1P02452 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL1A1P02452 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC6.51□□□□□ -1.37
COL1A1P02452 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.5□□□□□ -1.37
COL1A1P02452 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COL1A1P02452 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.5□□□□□ -1.37
COL1A1P02452 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
COL1A1P02452 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.5□□□□□ -1.37
COL1A1P02452 RNU4-4P-201ENST00000364588 130 ntBASIC6.5□□□□□ -1.37
COL1A1P02452 RNA5SP87-201ENST00000384155 118 ntBASIC6.5□□□□□ -1.37
COL1A1P02452 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COL1A1P02452 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL1A1P02452 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC6.5□□□□□ -1.37
COL1A1P02452 LINC02210-201ENST00000444561 288 ntBASIC6.5□□□□□ -1.37
COL1A1P02452 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC6.5□□□□□ -1.37
COL1A1P02452 IGBP1P3-201ENST00000447449 1000 ntBASIC6.5□□□□□ -1.37
COL1A1P02452 CBX1P2-201ENST00000453841 458 ntBASIC6.5□□□□□ -1.37
COL1A1P02452 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC6.5□□□□□ -1.37
COL1A1P02452 AC105420.1-201ENST00000504389 582 ntBASIC6.5□□□□□ -1.37
COL1A1P02452 OR51A1P-201ENST00000511110 946 ntBASIC6.5□□□□□ -1.37
COL1A1P02452 AC011447.4-201ENST00000587562 111 ntBASIC6.5□□□□□ -1.37
COL1A1P02452 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC6.5□□□□□ -1.37
COL1A1P02452 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.5□□□□□ -1.37
COL1A1P02452 AL352984.2-202ENST00000613699 155 ntBASIC6.5□□□□□ -1.37
COL1A1P02452 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
COL1A1P02452 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL1A1P02452 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL1A1P02452 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL1A1P02452 AL359715.3-201ENST00000569267 2123 ntBASIC6.5□□□□□ -1.37
COL1A1P02452 AC100757.1-201ENST00000616872 1835 ntBASIC6.5□□□□□ -1.37
COL1A1P02452 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.5□□□□□ -1.37
COL1A1P02452 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC6.5□□□□□ -1.37
COL1A1P02452 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COL1A1P02452 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC6.5□□□□□ -1.37
COL1A1P02452 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COL1A1P02452 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COL1A1P02452 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COL1A1P02452 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COL1A1P02452 AC006600.2-201ENST00000624834 2506 ntBASIC6.49□□□□□ -1.37
COL1A1P02452 AL355488.2-201ENST00000609909 2850 ntBASIC6.49□□□□□ -1.37
COL1A1P02452 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL1A1P02452 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COL1A1P02452 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL1A1P02452 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.49□□□□□ -1.37
COL1A1P02452 RN7SKP104-201ENST00000362605 328 ntBASIC6.49□□□□□ -1.37
COL1A1P02452 DNAJA1P4-201ENST00000406473 1166 ntBASIC6.49□□□□□ -1.37
COL1A1P02452 RNU6ATAC21P-201ENST00000408656 126 ntBASIC6.49□□□□□ -1.37
COL1A1P02452 AL807761.1-201ENST00000417622 171 ntBASIC6.49□□□□□ -1.37
COL1A1P02452 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COL1A1P02452 PA2G4P6-201ENST00000438325 1197 ntBASIC6.49□□□□□ -1.37
COL1A1P02452 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COL1A1P02452 AC002075.1-201ENST00000457396 676 ntBASIC6.49□□□□□ -1.37
COL1A1P02452 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
COL1A1P02452 AC007686.1-201ENST00000488511 463 ntBASIC6.49□□□□□ -1.37
COL1A1P02452 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COL1A1P02452 AC091912.1-201ENST00000511351 248 ntBASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms