Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.61□□□□□ -1.51
LDLRP01130 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LDLRP01130 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LDLRP01130 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LDLRP01130 RNA5SP443-201ENST00000363083 132 ntBASIC5.61□□□□□ -1.51
LDLRP01130 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
LDLRP01130 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LDLRP01130 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
LDLRP01130 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LDLRP01130 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
LDLRP01130 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LDLRP01130 NPM1P37-201ENST00000403105 874 ntBASIC5.61□□□□□ -1.51
LDLRP01130 AL445213.1-201ENST00000412589 747 ntBASIC5.61□□□□□ -1.51
LDLRP01130 AC019070.1-201ENST00000415008 1024 ntBASIC5.61□□□□□ -1.51
LDLRP01130 MTND4LP21-201ENST00000415303 295 ntBASIC5.61□□□□□ -1.51
LDLRP01130 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.61□□□□□ -1.51
LDLRP01130 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.61□□□□□ -1.51
LDLRP01130 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.61□□□□□ -1.51
LDLRP01130 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.61□□□□□ -1.51
LDLRP01130 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.61□□□□□ -1.51
LDLRP01130 AL445665.1-202ENST00000452436 324 ntBASIC5.61□□□□□ -1.51
LDLRP01130 RPSAP37-201ENST00000470913 821 ntBASIC5.61□□□□□ -1.51
LDLRP01130 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LDLRP01130 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.61□□□□□ -1.51
LDLRP01130 AC011416.1-201ENST00000514947 1732 ntBASIC5.61□□□□□ -1.51
LDLRP01130 Y_RNA.710-201ENST00000516975 110 ntBASIC5.61□□□□□ -1.51
LDLRP01130 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
LDLRP01130 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.61□□□□□ -1.51
LDLRP01130 IGKV2-18-201ENST00000522607 343 ntBASIC5.61□□□□□ -1.51
LDLRP01130 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.61□□□□□ -1.51
LDLRP01130 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.61□□□□□ -1.51
LDLRP01130 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.61□□□□□ -1.51
LDLRP01130 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.61□□□□□ -1.51
LDLRP01130 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.61□□□□□ -1.51
LDLRP01130 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.61□□□□□ -1.51
LDLRP01130 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.61□□□□□ -1.51
LDLRP01130 AC073429.2-201ENST00000569694 1444 ntBASIC5.61□□□□□ -1.51
LDLRP01130 AC010547.7-201ENST00000570323 333 ntBASIC5.61□□□□□ -1.51
LDLRP01130 TMF1P1-201ENST00000576058 373 ntBASIC5.61□□□□□ -1.51
LDLRP01130 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.61□□□□□ -1.51
LDLRP01130 AC119403.2-201ENST00000590960 598 ntBASIC5.61□□□□□ -1.51
LDLRP01130 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
LDLRP01130 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LDLRP01130 AL591167.1-201ENST00000607321 456 ntBASIC5.61□□□□□ -1.51
LDLRP01130 OR7M1P-201ENST00000608946 533 ntBASIC5.61□□□□□ -1.51
LDLRP01130 AC015712.7-201ENST00000615211 635 ntBASIC5.61□□□□□ -1.51
LDLRP01130 AL356752.1-201ENST00000615844 593 ntBASIC5.61□□□□□ -1.51
LDLRP01130 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.61□□□□□ -1.51
LDLRP01130 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
LDLRP01130 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.61□□□□□ -1.51
LDLRP01130 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LDLRP01130 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LDLRP01130 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.61□□□□□ -1.51
LDLRP01130 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
LDLRP01130 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.6□□□□□ -1.51
LDLRP01130 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
LDLRP01130 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LDLRP01130 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LDLRP01130 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.6□□□□□ -1.51
LDLRP01130 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.6□□□□□ -1.51
LDLRP01130 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LDLRP01130 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LDLRP01130 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.6□□□□□ -1.51
LDLRP01130 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LDLRP01130 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.6□□□□□ -1.51
LDLRP01130 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
LDLRP01130 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
LDLRP01130 OR9K1P-201ENST00000326513 941 ntBASIC5.6□□□□□ -1.51
LDLRP01130 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
LDLRP01130 RNFT1P3-201ENST00000340898 1052 ntBASIC5.6□□□□□ -1.51
LDLRP01130 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.6□□□□□ -1.51
LDLRP01130 SNORA5.1-201ENST00000384275 131 ntBASIC5.6□□□□□ -1.51
LDLRP01130 MT-RNR1-201ENST00000389680 954 ntBASIC5.6□□□□□ -1.51
LDLRP01130 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
LDLRP01130 AL607077.1-201ENST00000401718 499 ntBASIC5.6□□□□□ -1.51
LDLRP01130 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.6□□□□□ -1.51
LDLRP01130 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.6□□□□□ -1.51
LDLRP01130 RPL12P43-201ENST00000420608 499 ntBASIC5.6□□□□□ -1.51
LDLRP01130 AC007394.1-201ENST00000421941 531 ntBASIC5.6□□□□□ -1.51
LDLRP01130 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.6□□□□□ -1.51
LDLRP01130 NPM1P18-201ENST00000434232 732 ntBASIC5.6□□□□□ -1.51
LDLRP01130 AL627308.1-201ENST00000435693 821 ntBASIC5.6□□□□□ -1.51
LDLRP01130 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.6□□□□□ -1.51
LDLRP01130 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.6□□□□□ -1.51
LDLRP01130 HIGD1AP16-201ENST00000450986 258 ntBASIC5.6□□□□□ -1.51
LDLRP01130 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC5.6□□□□□ -1.51
LDLRP01130 YWHAEP1-201ENST00000453697 763 ntBASIC5.6□□□□□ -1.51
LDLRP01130 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.6□□□□□ -1.51
LDLRP01130 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.6□□□□□ -1.51
LDLRP01130 RPL34P33-201ENST00000486062 334 ntBASIC5.6□□□□□ -1.51
LDLRP01130 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.6□□□□□ -1.51
LDLRP01130 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.6□□□□□ -1.51
LDLRP01130 SCARNA18.1-201ENST00000516330 83 ntBASIC5.6□□□□□ -1.51
LDLRP01130 SNORA70.17-201ENST00000516449 133 ntBASIC5.6□□□□□ -1.51
LDLRP01130 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
LDLRP01130 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.6□□□□□ -1.51
LDLRP01130 AC090424.1-201ENST00000535243 736 ntBASIC5.6□□□□□ -1.51
LDLRP01130 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC5.6□□□□□ -1.51
LDLRP01130 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.6□□□□□ -1.51
LDLRP01130 AL513327.3-201ENST00000602618 469 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms