Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.4□□□□□ -1.54
SNX3O60493 AC091059.2-201ENST00000623355 614 ntBASIC5.4□□□□□ -1.54
SNX3O60493 AL118508.4-201ENST00000624142 1176 ntBASIC5.4□□□□□ -1.54
SNX3O60493 AL139254.3-201ENST00000641097 674 ntBASIC5.4□□□□□ -1.54
SNX3O60493 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
SNX3O60493 MT-RNR2-201ENST00000387347 1559 ntBASIC5.4□□□□□ -1.55
SNX3O60493 AC011447.7-201ENST00000624228 1590 ntBASIC5.4□□□□□ -1.55
SNX3O60493 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.55
SNX3O60493 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.4□□□□□ -1.55
SNX3O60493 ZNF652P1-201ENST00000442420 1309 ntBASIC5.4□□□□□ -1.55
SNX3O60493 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.4□□□□□ -1.55
SNX3O60493 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SNX3O60493 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.4□□□□□ -1.55
SNX3O60493 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.4□□□□□ -1.55
SNX3O60493 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SNX3O60493 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.4□□□□□ -1.55
SNX3O60493 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
SNX3O60493 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
SNX3O60493 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SNX3O60493 AL450345.1-202ENST00000605741 3881 ntBASIC5.39□□□□□ -1.55
SNX3O60493 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SNX3O60493 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SNX3O60493 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.39□□□□□ -1.55
SNX3O60493 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
SNX3O60493 AL159987.1-201ENST00000347911 293 ntBASIC5.39□□□□□ -1.55
SNX3O60493 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SNX3O60493 RNA5SP30-201ENST00000365552 115 ntBASIC5.39□□□□□ -1.55
SNX3O60493 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SNX3O60493 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SNX3O60493 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SNX3O60493 AL136116.2-201ENST00000404020 785 ntBASIC5.39□□□□□ -1.55
SNX3O60493 CBX1P3-201ENST00000413296 527 ntBASIC5.39□□□□□ -1.55
SNX3O60493 AC007738.1-201ENST00000413892 348 ntBASIC5.39□□□□□ -1.55
SNX3O60493 MRPL53P1-201ENST00000414323 319 ntBASIC5.39□□□□□ -1.55
SNX3O60493 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.39□□□□□ -1.55
SNX3O60493 AC007064.3-201ENST00000422608 359 ntBASIC5.39□□□□□ -1.55
SNX3O60493 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SNX3O60493 HSPE1P16-201ENST00000426640 348 ntBASIC5.39□□□□□ -1.55
SNX3O60493 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.39□□□□□ -1.55
SNX3O60493 ARL4AP4-201ENST00000434170 518 ntBASIC5.39□□□□□ -1.55
SNX3O60493 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.39□□□□□ -1.55
SNX3O60493 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC5.39□□□□□ -1.55
SNX3O60493 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC5.39□□□□□ -1.55
SNX3O60493 RNA5SP103-201ENST00000459503 118 ntBASIC5.39□□□□□ -1.55
SNX3O60493 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.39□□□□□ -1.55
SNX3O60493 AP003385.3-201ENST00000472498 287 ntBASIC5.39□□□□□ -1.55
SNX3O60493 AC007688.1-201ENST00000475592 759 ntBASIC5.39□□□□□ -1.55
SNX3O60493 RN7SL583P-201ENST00000475692 287 ntBASIC5.39□□□□□ -1.55
SNX3O60493 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.39□□□□□ -1.55
SNX3O60493 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.39□□□□□ -1.55
SNX3O60493 GAPDHP71-201ENST00000511530 1003 ntBASIC5.39□□□□□ -1.55
SNX3O60493 OR8G3P-201ENST00000533406 921 ntBASIC5.39□□□□□ -1.55
SNX3O60493 AC005000.1-201ENST00000536192 288 ntBASIC5.39□□□□□ -1.55
SNX3O60493 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.39□□□□□ -1.55
SNX3O60493 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.39□□□□□ -1.55
SNX3O60493 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.39□□□□□ -1.55
SNX3O60493 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
SNX3O60493 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.39□□□□□ -1.55
SNX3O60493 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SNX3O60493 RN7SL435P-201ENST00000584418 282 ntBASIC5.39□□□□□ -1.55
SNX3O60493 AC005229.3-201ENST00000603438 323 ntBASIC5.39□□□□□ -1.55
SNX3O60493 AL390877.1-201ENST00000605704 214 ntBASIC5.39□□□□□ -1.55
SNX3O60493 AC023206.1-201ENST00000605824 298 ntBASIC5.39□□□□□ -1.55
SNX3O60493 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.39□□□□□ -1.55
SNX3O60493 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.39□□□□□ -1.55
SNX3O60493 AC244107.2-201ENST00000611773 76 ntBASIC5.39□□□□□ -1.55
SNX3O60493 AL590410.1-201ENST00000617925 333 ntBASIC5.39□□□□□ -1.55
SNX3O60493 AL136228.1-201ENST00000622221 319 ntBASIC5.39□□□□□ -1.55
SNX3O60493 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SNX3O60493 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.39□□□□□ -1.55
SNX3O60493 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SNX3O60493 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SNX3O60493 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.39□□□□□ -1.55
SNX3O60493 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SNX3O60493 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
SNX3O60493 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
SNX3O60493 AC008627.1-201ENST00000517511 1704 ntBASIC5.38□□□□□ -1.55
SNX3O60493 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.38□□□□□ -1.55
SNX3O60493 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SNX3O60493 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SNX3O60493 RNU6-697P-201ENST00000363348 107 ntBASIC5.38□□□□□ -1.55
SNX3O60493 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC5.38□□□□□ -1.55
SNX3O60493 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC5.38□□□□□ -1.55
SNX3O60493 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
SNX3O60493 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SNX3O60493 RAB5CP1-201ENST00000395972 580 ntBASIC5.38□□□□□ -1.55
SNX3O60493 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SNX3O60493 MIR1266-201ENST00000408125 84 ntBASIC5.38□□□□□ -1.55
SNX3O60493 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.38□□□□□ -1.55
SNX3O60493 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.38□□□□□ -1.55
SNX3O60493 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.38□□□□□ -1.55
SNX3O60493 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
SNX3O60493 GAPDHP19-201ENST00000431768 1005 ntBASIC5.38□□□□□ -1.55
SNX3O60493 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.38□□□□□ -1.55
SNX3O60493 RSL24D1P8-201ENST00000434442 492 ntBASIC5.38□□□□□ -1.55
SNX3O60493 AC046176.1-201ENST00000435260 1170 ntBASIC5.38□□□□□ -1.55
SNX3O60493 RPS10P14-201ENST00000440748 502 ntBASIC5.38□□□□□ -1.55
SNX3O60493 AL158214.1-201ENST00000444423 404 ntBASIC5.38□□□□□ -1.55
SNX3O60493 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.38□□□□□ -1.55
SNX3O60493 BTF3P6-201ENST00000448054 499 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms