Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
PCDHB1Q9Y5F3 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PCDHB1Q9Y5F3 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PCDHB1Q9Y5F3 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.23□□□□□ -1.41
PCDHB1Q9Y5F3 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PCDHB1Q9Y5F3 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.23□□□□□ -1.41
PCDHB1Q9Y5F3 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.23□□□□□ -1.41
PCDHB1Q9Y5F3 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PCDHB1Q9Y5F3 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PCDHB1Q9Y5F3 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PCDHB1Q9Y5F3 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.23□□□□□ -1.41
PCDHB1Q9Y5F3 SPATA2P1-201ENST00000431223 2055 ntBASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 RNA5SP105-201ENST00000391123 113 ntBASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 AL445238.1-204ENST00000400311 463 ntBASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 AL096711.1-201ENST00000404780 554 ntBASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 GTF2IP5-201ENST00000414608 731 ntBASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 EIF4A1P1-201ENST00000420241 934 ntBASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 MTCO1P53-201ENST00000441633 699 ntBASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 AL645936.1-201ENST00000441979 518 ntBASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 AL358794.1-201ENST00000445689 381 ntBASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 CYCSP42-201ENST00000450823 238 ntBASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 LRRC37A14P-201ENST00000452297 462 ntBASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 HLA-DPA3-207ENST00000454398 229 ntBASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 RPL12P31-201ENST00000478433 450 ntBASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 METTL15P1-201ENST00000481421 1045 ntBASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 AC010374.1-201ENST00000503762 1237 ntBASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 AC105420.1-201ENST00000504389 582 ntBASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 OR7E99P-201ENST00000505750 922 ntBASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 MTATP6P1-201ENST00000514057 681 ntBASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 RN7SKP141-201ENST00000516167 338 ntBASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 IGKV3D-25-201ENST00000519599 235 ntBASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 LRRC34P1-201ENST00000542742 915 ntBASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 AC079905.1-201ENST00000549280 475 ntBASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 CYB5AP5-201ENST00000549779 389 ntBASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 AC008507.3-201ENST00000585753 472 ntBASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 AL451064.1-201ENST00000607718 471 ntBASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 Z99129.2-201ENST00000619967 314 ntBASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 AC136428.4-201ENST00000634254 1155 ntBASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 AC103703.1-201ENST00000634783 663 ntBASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 MFSD8-213ENST00000641134 1327 ntBASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHB1Q9Y5F3 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.21□□□□□ -1.41
PCDHB1Q9Y5F3 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.21□□□□□ -1.41
PCDHB1Q9Y5F3 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
PCDHB1Q9Y5F3 NEPNP-201ENST00000404786 1371 ntBASIC6.21□□□□□ -1.41
PCDHB1Q9Y5F3 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.21□□□□□ -1.41
PCDHB1Q9Y5F3 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
PCDHB1Q9Y5F3 PCF11-AS1-201ENST00000602322 1516 ntBASIC6.21□□□□□ -1.42
PCDHB1Q9Y5F3 ZNF29P-201ENST00000225587 168 ntBASIC6.21□□□□□ -1.42
PCDHB1Q9Y5F3 AL451046.1-201ENST00000406097 534 ntBASIC6.21□□□□□ -1.42
PCDHB1Q9Y5F3 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC6.21□□□□□ -1.42
PCDHB1Q9Y5F3 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.21□□□□□ -1.42
PCDHB1Q9Y5F3 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.21□□□□□ -1.42
PCDHB1Q9Y5F3 AC094019.1-201ENST00000434678 472 ntBASIC6.21□□□□□ -1.42
PCDHB1Q9Y5F3 AC023512.1-201ENST00000444513 499 ntBASIC6.21□□□□□ -1.42
PCDHB1Q9Y5F3 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC6.21□□□□□ -1.42
PCDHB1Q9Y5F3 RPL7L1P3-201ENST00000455249 689 ntBASIC6.21□□□□□ -1.42
PCDHB1Q9Y5F3 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.21□□□□□ -1.42
PCDHB1Q9Y5F3 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC6.21□□□□□ -1.42
PCDHB1Q9Y5F3 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC6.21□□□□□ -1.42
PCDHB1Q9Y5F3 RN7SL174P-201ENST00000475578 289 ntBASIC6.21□□□□□ -1.42
PCDHB1Q9Y5F3 AOX3P-204ENST00000491025 2107 ntBASIC6.21□□□□□ -1.42
PCDHB1Q9Y5F3 AC020699.1-201ENST00000505161 445 ntBASIC6.21□□□□□ -1.42
PCDHB1Q9Y5F3 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC6.21□□□□□ -1.42
PCDHB1Q9Y5F3 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms