Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
CNTN3Q9P232 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CNTN3Q9P232 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CNTN3Q9P232 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CNTN3Q9P232 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CNTN3Q9P232 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CNTN3Q9P232 MIR551B-201ENST00000384984 96 ntBASIC7.41□□□□□ -1.22
CNTN3Q9P232 MIR1266-201ENST00000408125 84 ntBASIC7.41□□□□□ -1.22
CNTN3Q9P232 RPL7P8-201ENST00000411964 730 ntBASIC7.41□□□□□ -1.22
CNTN3Q9P232 RPS15AP38-201ENST00000413110 372 ntBASIC7.41□□□□□ -1.22
CNTN3Q9P232 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC7.41□□□□□ -1.22
CNTN3Q9P232 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC7.41□□□□□ -1.22
CNTN3Q9P232 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC7.41□□□□□ -1.22
CNTN3Q9P232 RPS10P21-201ENST00000430654 475 ntBASIC7.41□□□□□ -1.22
CNTN3Q9P232 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC7.41□□□□□ -1.22
CNTN3Q9P232 DEFA9P-201ENST00000433042 285 ntBASIC7.41□□□□□ -1.22
CNTN3Q9P232 AL121601.2-201ENST00000438019 707 ntBASIC7.41□□□□□ -1.22
CNTN3Q9P232 HBG2-204ENST00000444587 307 ntTSL 2 BASIC7.41□□□□□ -1.22
CNTN3Q9P232 AL121578.2-201ENST00000448797 447 ntBASIC7.41□□□□□ -1.22
CNTN3Q9P232 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC7.41□□□□□ -1.22
CNTN3Q9P232 AL390728.3-201ENST00000452704 270 ntBASIC7.41□□□□□ -1.22
CNTN3Q9P232 AC022080.2-201ENST00000452932 533 ntBASIC7.41□□□□□ -1.22
CNTN3Q9P232 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC7.41□□□□□ -1.22
CNTN3Q9P232 MTCO3P38-201ENST00000468910 766 ntBASIC7.41□□□□□ -1.22
CNTN3Q9P232 AC109486.1-201ENST00000486833 374 ntBASIC7.41□□□□□ -1.22
CNTN3Q9P232 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC7.41□□□□□ -1.22
CNTN3Q9P232 RN7SL612P-201ENST00000497704 295 ntBASIC7.41□□□□□ -1.22
CNTN3Q9P232 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC7.41□□□□□ -1.22
CNTN3Q9P232 BNIP3P41-201ENST00000503774 571 ntBASIC7.41□□□□□ -1.22
CNTN3Q9P232 AC114324.2-202ENST00000503812 134 ntBASIC7.41□□□□□ -1.22
CNTN3Q9P232 MRPL57P6-201ENST00000506570 309 ntBASIC7.41□□□□□ -1.22
CNTN3Q9P232 PGBD4P4-201ENST00000509673 613 ntBASIC7.41□□□□□ -1.22
CNTN3Q9P232 UGT2A3P7-201ENST00000510485 734 ntBASIC7.41□□□□□ -1.22
CNTN3Q9P232 RNU6-528P-201ENST00000516926 100 ntBASIC7.41□□□□□ -1.22
CNTN3Q9P232 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC7.41□□□□□ -1.22
CNTN3Q9P232 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC7.41□□□□□ -1.22
CNTN3Q9P232 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC7.41□□□□□ -1.22
CNTN3Q9P232 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CNTN3Q9P232 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC7.41□□□□□ -1.22
CNTN3Q9P232 AC037479.1-201ENST00000558361 625 ntBASIC7.41□□□□□ -1.22
CNTN3Q9P232 MTCO1P40-201ENST00000574371 625 ntBASIC7.41□□□□□ -1.22
CNTN3Q9P232 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC7.41□□□□□ -1.22
CNTN3Q9P232 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC7.41□□□□□ -1.22
CNTN3Q9P232 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC7.41□□□□□ -1.22
CNTN3Q9P232 AC090616.1-201ENST00000583895 447 ntBASIC7.41□□□□□ -1.22
CNTN3Q9P232 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC7.41□□□□□ -1.22
CNTN3Q9P232 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC7.41□□□□□ -1.22
CNTN3Q9P232 AC007684.1-201ENST00000609671 477 ntBASIC7.41□□□□□ -1.22
CNTN3Q9P232 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC7.41□□□□□ -1.22
CNTN3Q9P232 AC008083.4-201ENST00000615076 444 ntBASIC7.41□□□□□ -1.22
CNTN3Q9P232 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC7.41□□□□□ -1.22
CNTN3Q9P232 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC7.41□□□□□ -1.22
CNTN3Q9P232 AC063952.1-203ENST00000634410 658 ntBASIC7.41□□□□□ -1.22
CNTN3Q9P232 AC183089.2-201ENST00000637931 916 ntBASIC7.41□□□□□ -1.22
CNTN3Q9P232 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
CNTN3Q9P232 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC7.41□□□□□ -1.22
CNTN3Q9P232 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC7.41□□□□□ -1.22
CNTN3Q9P232 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
CNTN3Q9P232 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC7.41□□□□□ -1.22
CNTN3Q9P232 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
CNTN3Q9P232 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC7.41□□□□□ -1.22
CNTN3Q9P232 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC7.41□□□□□ -1.22
CNTN3Q9P232 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
CNTN3Q9P232 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC7.41□□□□□ -1.22
CNTN3Q9P232 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CNTN3Q9P232 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CNTN3Q9P232 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC7.41□□□□□ -1.22
CNTN3Q9P232 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
CNTN3Q9P232 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
CNTN3Q9P232 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
CNTN3Q9P232 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
CNTN3Q9P232 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CNTN3Q9P232 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CNTN3Q9P232 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC7.4□□□□□ -1.22
CNTN3Q9P232 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
CNTN3Q9P232 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CNTN3Q9P232 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC7.4□□□□□ -1.22
CNTN3Q9P232 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
CNTN3Q9P232 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CNTN3Q9P232 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
CNTN3Q9P232 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC7.4□□□□□ -1.22
CNTN3Q9P232 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CNTN3Q9P232 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
CNTN3Q9P232 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CNTN3Q9P232 RNU6-1042P-201ENST00000384204 107 ntBASIC7.4□□□□□ -1.22
CNTN3Q9P232 MIR199B-201ENST00000384849 110 ntBASIC7.4□□□□□ -1.22
CNTN3Q9P232 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC7.4□□□□□ -1.22
CNTN3Q9P232 RN7SKP33-201ENST00000410942 340 ntBASIC7.4□□□□□ -1.22
CNTN3Q9P232 RPS27AP7-201ENST00000422792 455 ntBASIC7.4□□□□□ -1.22
CNTN3Q9P232 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC7.4□□□□□ -1.22
CNTN3Q9P232 USP9YP31-201ENST00000431405 881 ntBASIC7.4□□□□□ -1.22
CNTN3Q9P232 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC7.4□□□□□ -1.22
CNTN3Q9P232 PA2G4P1-201ENST00000442248 1197 ntBASIC7.4□□□□□ -1.22
CNTN3Q9P232 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
CNTN3Q9P232 RN7SL216P-201ENST00000471607 298 ntBASIC7.4□□□□□ -1.22
CNTN3Q9P232 RN7SL70P-201ENST00000478322 302 ntBASIC7.4□□□□□ -1.22
CNTN3Q9P232 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC7.4□□□□□ -1.22
CNTN3Q9P232 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC7.4□□□□□ -1.22
CNTN3Q9P232 RFPL4AP3-201ENST00000515267 345 ntBASIC7.4□□□□□ -1.22
CNTN3Q9P232 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC7.4□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 155.7 ms