Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AC135050.6-202ENST00000613584 392 ntBASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 AC244196.3-201ENST00000614171 374 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 Metazoa_SRP.99-201ENST00000621370 254 ntBASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 NR1I3-235ENST00000628566 1201 ntTSL 5 BASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 AL138924.1-201ENST00000629067 415 ntTSL 3 BASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 OR9K2-204ENST00000641374 1122 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 GUCY2F-201ENST00000218006 3714 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 SERPINB13-202ENST00000344731 3114 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 CDY2B-201ENST00000382867 1961 ntAPPRIS ALT1 BASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 CAP1-206ENST00000372805 2217 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 DZANK1-203ENST00000357236 3739 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 NCOA4P2-201ENST00000340589 1813 ntBASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 RARSP1-201ENST00000542842 1418 ntBASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 PRKAR2A-AS1-202ENST00000416209 3447 ntTSL 2 BASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 NUDT13-203ENST00000372997 1919 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 RAD54B-202ENST00000336148 3068 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 BSPH1-201ENST00000344839 654 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 RNU6-621P-201ENST00000364752 109 ntBASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 C9orf92-202ENST00000380685 379 ntAPPRIS ALT2 TSL 2 BASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 RNA5SP297-201ENST00000391029 113 ntBASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 USP9YP27-201ENST00000418455 438 ntBASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 AIMP1P1-201ENST00000418670 937 ntBASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 AC064875.1-203ENST00000422996 582 ntTSL 4 BASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 AL138479.1-201ENST00000426913 484 ntBASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 MTCO1P3-201ENST00000429327 192 ntBASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 ACTR3P2-201ENST00000439585 1257 ntBASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 RPL23AP35-201ENST00000451906 501 ntBASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 AC007000.1-201ENST00000453064 794 ntBASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 AC092757.1-201ENST00000467293 467 ntBASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 RN7SL36P-201ENST00000469345 276 ntBASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 AC109454.1-201ENST00000471205 498 ntBASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 RN7SL647P-201ENST00000485429 300 ntBASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 EIF3LP3-201ENST00000495197 822 ntBASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 AC113352.1-201ENST00000513196 666 ntBASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 ATG10-208ENST00000513634 618 ntTSL 2 BASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 RNU6-264P-201ENST00000517134 104 ntBASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 MINCR-206ENST00000524335 499 ntTSL 2 BASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 HPRT1P3-201ENST00000539521 576 ntBASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 AL163952.1-202ENST00000569625 600 ntBASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 RN7SL697P-201ENST00000582484 299 ntBASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 AC006006.1-201ENST00000603082 144 ntBASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 NRBF2P5-201ENST00000603087 788 ntBASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 AC016405.2-201ENST00000607393 312 ntBASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 AP004607.9-201ENST00000618202 316 ntBASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 NPPA-AS1_1.1-201ENST00000622391 173 ntBASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 MIR1321-201ENST00000637766 79 ntBASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 OR10G8-202ENST00000641224 1033 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 CRBN-203ENST00000432408 2203 ntAPPRIS ALT1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 FAM49A-201ENST00000381323 4670 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 DCAF13P1-201ENST00000495256 1330 ntBASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 OSGIN2-201ENST00000297438 4209 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 COX7C-203ENST00000509578 1584 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 ESRRG-222ENST00000493748 2074 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 MAPK10-290ENST00000641237 2826 ntBASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 LARGE-AS1-203ENST00000438159 2618 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 NDUFS1-204ENST00000440274 2394 ntTSL 2 BASIC7.45□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms