Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
SALL1Q9NSC2 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SALL1Q9NSC2 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SALL1Q9NSC2 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
SALL1Q9NSC2 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SALL1Q9NSC2 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6.6□□□□□ -1.35
SALL1Q9NSC2 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.6□□□□□ -1.35
SALL1Q9NSC2 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SALL1Q9NSC2 SNORA70-201ENST00000384436 135 ntBASIC6.6□□□□□ -1.35
SALL1Q9NSC2 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
SALL1Q9NSC2 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
SALL1Q9NSC2 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
SALL1Q9NSC2 AL133388.1-201ENST00000404509 287 ntBASIC6.6□□□□□ -1.35
SALL1Q9NSC2 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC6.6□□□□□ -1.35
SALL1Q9NSC2 RPL12P17-201ENST00000432393 498 ntBASIC6.6□□□□□ -1.35
SALL1Q9NSC2 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC6.6□□□□□ -1.35
SALL1Q9NSC2 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC6.6□□□□□ -1.35
SALL1Q9NSC2 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC6.6□□□□□ -1.35
SALL1Q9NSC2 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC6.6□□□□□ -1.35
SALL1Q9NSC2 HMGB1P40-201ENST00000525121 540 ntBASIC6.6□□□□□ -1.35
SALL1Q9NSC2 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
SALL1Q9NSC2 AC044860.2-201ENST00000561005 179 ntBASIC6.6□□□□□ -1.35
SALL1Q9NSC2 BNIP3P32-201ENST00000600015 554 ntBASIC6.6□□□□□ -1.35
SALL1Q9NSC2 AC009237.13-201ENST00000603193 276 ntBASIC6.6□□□□□ -1.35
SALL1Q9NSC2 AC126915.2-201ENST00000610957 190 ntBASIC6.6□□□□□ -1.35
SALL1Q9NSC2 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC6.6□□□□□ -1.35
SALL1Q9NSC2 AC090527.3-201ENST00000619041 548 ntBASIC6.6□□□□□ -1.35
SALL1Q9NSC2 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.6□□□□□ -1.35
SALL1Q9NSC2 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SALL1Q9NSC2 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SALL1Q9NSC2 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.6□□□□□ -1.35
SALL1Q9NSC2 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SALL1Q9NSC2 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
SALL1Q9NSC2 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.6□□□□□ -1.35
SALL1Q9NSC2 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.6□□□□□ -1.35
SALL1Q9NSC2 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.59□□□□□ -1.35
SALL1Q9NSC2 AC093297.3-201ENST00000607056 2517 ntBASIC6.59□□□□□ -1.35
SALL1Q9NSC2 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SALL1Q9NSC2 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SALL1Q9NSC2 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC6.59□□□□□ -1.35
SALL1Q9NSC2 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
SALL1Q9NSC2 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SALL1Q9NSC2 SNORA67-201ENST00000384423 137 ntBASIC6.59□□□□□ -1.35
SALL1Q9NSC2 RNA5SP487-201ENST00000410186 122 ntBASIC6.59□□□□□ -1.35
SALL1Q9NSC2 RPSAP35-201ENST00000413753 818 ntBASIC6.59□□□□□ -1.35
SALL1Q9NSC2 MED28P3-201ENST00000444288 531 ntBASIC6.59□□□□□ -1.35
SALL1Q9NSC2 GAPDHP25-201ENST00000447061 1001 ntBASIC6.59□□□□□ -1.35
SALL1Q9NSC2 SBDSP1-204ENST00000453858 737 ntBASIC6.59□□□□□ -1.35
SALL1Q9NSC2 RNU6-941P-201ENST00000516346 108 ntBASIC6.59□□□□□ -1.35
SALL1Q9NSC2 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
SALL1Q9NSC2 OR10G5P-201ENST00000532733 358 ntBASIC6.59□□□□□ -1.35
SALL1Q9NSC2 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC6.59□□□□□ -1.35
SALL1Q9NSC2 AC084824.2-201ENST00000548906 345 ntBASIC6.59□□□□□ -1.35
SALL1Q9NSC2 NMNAT1P5-201ENST00000559657 841 ntBASIC6.59□□□□□ -1.35
SALL1Q9NSC2 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC6.59□□□□□ -1.35
SALL1Q9NSC2 AC037198.3-201ENST00000616754 526 ntBASIC6.59□□□□□ -1.35
SALL1Q9NSC2 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC6.59□□□□□ -1.35
SALL1Q9NSC2 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SALL1Q9NSC2 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
SALL1Q9NSC2 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SALL1Q9NSC2 AC018809.2-201ENST00000602436 3823 ntBASIC6.59□□□□□ -1.35
SALL1Q9NSC2 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SALL1Q9NSC2 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
SALL1Q9NSC2 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.59□□□□□ -1.36
SALL1Q9NSC2 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SALL1Q9NSC2 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SALL1Q9NSC2 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
SALL1Q9NSC2 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.58□□□□□ -1.36
SALL1Q9NSC2 RNA5SP443-201ENST00000363083 132 ntBASIC6.58□□□□□ -1.36
SALL1Q9NSC2 U8.4-201ENST00000363626 134 ntBASIC6.58□□□□□ -1.36
SALL1Q9NSC2 RPL23AP27-201ENST00000415161 451 ntBASIC6.58□□□□□ -1.36
SALL1Q9NSC2 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC6.58□□□□□ -1.36
SALL1Q9NSC2 GSTM5P1-201ENST00000434751 660 ntBASIC6.58□□□□□ -1.36
SALL1Q9NSC2 GAPDHP58-201ENST00000438477 1006 ntBASIC6.58□□□□□ -1.36
SALL1Q9NSC2 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.58□□□□□ -1.36
SALL1Q9NSC2 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC6.58□□□□□ -1.36
SALL1Q9NSC2 RPL32P9-201ENST00000487963 407 ntBASIC6.58□□□□□ -1.36
SALL1Q9NSC2 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.58□□□□□ -1.36
SALL1Q9NSC2 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SALL1Q9NSC2 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC6.58□□□□□ -1.36
SALL1Q9NSC2 SCARNA16.4-201ENST00000516956 187 ntBASIC6.58□□□□□ -1.36
SALL1Q9NSC2 SEPT10P1-201ENST00000517342 1162 ntBASIC6.58□□□□□ -1.36
SALL1Q9NSC2 AC022832.1-201ENST00000530718 645 ntBASIC6.58□□□□□ -1.36
SALL1Q9NSC2 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC6.58□□□□□ -1.36
SALL1Q9NSC2 RPL10P14-201ENST00000565265 298 ntBASIC6.58□□□□□ -1.36
SALL1Q9NSC2 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.58□□□□□ -1.36
SALL1Q9NSC2 AL136295.6-201ENST00000610486 658 ntBASIC6.58□□□□□ -1.36
SALL1Q9NSC2 MIR6730-201ENST00000622213 67 ntBASIC6.58□□□□□ -1.36
SALL1Q9NSC2 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
SALL1Q9NSC2 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.58□□□□□ -1.36
SALL1Q9NSC2 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.58□□□□□ -1.36
SALL1Q9NSC2 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
SALL1Q9NSC2 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SALL1Q9NSC2 AC068870.1-201ENST00000563737 2455 ntBASIC6.58□□□□□ -1.36
SALL1Q9NSC2 OR55B1P-203ENST00000641518 2602 ntBASIC6.58□□□□□ -1.36
SALL1Q9NSC2 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.58□□□□□ -1.36
SALL1Q9NSC2 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SALL1Q9NSC2 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SALL1Q9NSC2 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SALL1Q9NSC2 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms