Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.75□□□□□ -1.49
TM9SF3Q9HD45 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
TM9SF3Q9HD45 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.75□□□□□ -1.49
TM9SF3Q9HD45 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
TM9SF3Q9HD45 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.75□□□□□ -1.49
TM9SF3Q9HD45 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
TM9SF3Q9HD45 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
TM9SF3Q9HD45 RNU6-249P-201ENST00000363016 102 ntBASIC5.75□□□□□ -1.49
TM9SF3Q9HD45 U3.7-201ENST00000363668 216 ntBASIC5.75□□□□□ -1.49
TM9SF3Q9HD45 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.75□□□□□ -1.49
TM9SF3Q9HD45 RMRPP5-201ENST00000411156 267 ntBASIC5.75□□□□□ -1.49
TM9SF3Q9HD45 AC002524.1-201ENST00000411687 547 ntBASIC5.75□□□□□ -1.49
TM9SF3Q9HD45 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.75□□□□□ -1.49
TM9SF3Q9HD45 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.75□□□□□ -1.49
TM9SF3Q9HD45 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC5.75□□□□□ -1.49
TM9SF3Q9HD45 AC073410.1-201ENST00000435125 589 ntBASIC5.75□□□□□ -1.49
TM9SF3Q9HD45 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.75□□□□□ -1.49
TM9SF3Q9HD45 AL390119.1-201ENST00000440329 312 ntBASIC5.75□□□□□ -1.49
TM9SF3Q9HD45 OSTCP1-201ENST00000455507 450 ntBASIC5.75□□□□□ -1.49
TM9SF3Q9HD45 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
TM9SF3Q9HD45 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.75□□□□□ -1.49
TM9SF3Q9HD45 AC008410.1-201ENST00000483777 339 ntBASIC5.75□□□□□ -1.49
TM9SF3Q9HD45 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.75□□□□□ -1.49
TM9SF3Q9HD45 AC009120.1-201ENST00000493458 473 ntBASIC5.75□□□□□ -1.49
TM9SF3Q9HD45 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.75□□□□□ -1.49
TM9SF3Q9HD45 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.75□□□□□ -1.49
TM9SF3Q9HD45 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.75□□□□□ -1.49
TM9SF3Q9HD45 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.75□□□□□ -1.49
TM9SF3Q9HD45 IMMP1LP3-201ENST00000604197 224 ntBASIC5.75□□□□□ -1.49
TM9SF3Q9HD45 AC021766.1-201ENST00000624404 741 ntBASIC5.75□□□□□ -1.49
TM9SF3Q9HD45 AL390318.1-201ENST00000624564 687 ntBASIC5.75□□□□□ -1.49
TM9SF3Q9HD45 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
TM9SF3Q9HD45 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
TM9SF3Q9HD45 THAP12P9-201ENST00000503971 2360 ntBASIC5.75□□□□□ -1.49
TM9SF3Q9HD45 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.75□□□□□ -1.49
TM9SF3Q9HD45 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.75□□□□□ -1.49
TM9SF3Q9HD45 MRE11P1-201ENST00000464884 2127 ntBASIC5.75□□□□□ -1.49
TM9SF3Q9HD45 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
TM9SF3Q9HD45 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
TM9SF3Q9HD45 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
TM9SF3Q9HD45 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TM9SF3Q9HD45 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.74□□□□□ -1.49
TM9SF3Q9HD45 AC235565.1-201ENST00000456962 1325 ntBASIC5.74□□□□□ -1.49
TM9SF3Q9HD45 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.74□□□□□ -1.49
TM9SF3Q9HD45 AC114786.1-201ENST00000512892 1415 ntBASIC5.74□□□□□ -1.49
TM9SF3Q9HD45 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.74□□□□□ -1.49
TM9SF3Q9HD45 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TM9SF3Q9HD45 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
TM9SF3Q9HD45 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.74□□□□□ -1.49
TM9SF3Q9HD45 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TM9SF3Q9HD45 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
TM9SF3Q9HD45 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
TM9SF3Q9HD45 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TM9SF3Q9HD45 MIR137-201ENST00000385223 102 ntBASIC5.74□□□□□ -1.49
TM9SF3Q9HD45 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.74□□□□□ -1.49
TM9SF3Q9HD45 AP000534.2-201ENST00000412729 568 ntBASIC5.74□□□□□ -1.49
TM9SF3Q9HD45 AL357752.1-201ENST00000412817 349 ntBASIC5.74□□□□□ -1.49
TM9SF3Q9HD45 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.74□□□□□ -1.49
TM9SF3Q9HD45 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.74□□□□□ -1.49
TM9SF3Q9HD45 AC113412.1-201ENST00000425840 504 ntBASIC5.74□□□□□ -1.49
TM9SF3Q9HD45 VTI1BP4-201ENST00000427516 527 ntBASIC5.74□□□□□ -1.49
TM9SF3Q9HD45 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.74□□□□□ -1.49
TM9SF3Q9HD45 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TM9SF3Q9HD45 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.74□□□□□ -1.49
TM9SF3Q9HD45 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.74□□□□□ -1.49
TM9SF3Q9HD45 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TM9SF3Q9HD45 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.74□□□□□ -1.49
TM9SF3Q9HD45 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.74□□□□□ -1.49
TM9SF3Q9HD45 COPS8P2-201ENST00000473228 627 ntBASIC5.74□□□□□ -1.49
TM9SF3Q9HD45 PFN1P6-201ENST00000476786 399 ntBASIC5.74□□□□□ -1.49
TM9SF3Q9HD45 RPL32P33-201ENST00000487023 394 ntBASIC5.74□□□□□ -1.49
TM9SF3Q9HD45 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.74□□□□□ -1.49
TM9SF3Q9HD45 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.74□□□□□ -1.49
TM9SF3Q9HD45 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.74□□□□□ -1.49
TM9SF3Q9HD45 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.74□□□□□ -1.49
TM9SF3Q9HD45 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.74□□□□□ -1.49
TM9SF3Q9HD45 AC244502.2-201ENST00000543361 851 ntBASIC5.74□□□□□ -1.49
TM9SF3Q9HD45 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.74□□□□□ -1.49
TM9SF3Q9HD45 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.74□□□□□ -1.49
TM9SF3Q9HD45 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.74□□□□□ -1.49
TM9SF3Q9HD45 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.74□□□□□ -1.49
TM9SF3Q9HD45 AL713998.2-201ENST00000604538 1198 ntBASIC5.74□□□□□ -1.49
TM9SF3Q9HD45 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.74□□□□□ -1.49
TM9SF3Q9HD45 AC018445.2-201ENST00000622987 260 ntBASIC5.74□□□□□ -1.49
TM9SF3Q9HD45 AP003072.5-201ENST00000623872 773 ntBASIC5.74□□□□□ -1.49
TM9SF3Q9HD45 AC004808.2-201ENST00000627965 773 ntBASIC5.74□□□□□ -1.49
TM9SF3Q9HD45 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.74□□□□□ -1.49
TM9SF3Q9HD45 CASC19-248ENST00000641674 1356 ntBASIC5.74□□□□□ -1.49
TM9SF3Q9HD45 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TM9SF3Q9HD45 AL359955.1-201ENST00000455242 3275 ntBASIC5.74□□□□□ -1.49
TM9SF3Q9HD45 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
TM9SF3Q9HD45 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
TM9SF3Q9HD45 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.74□□□□□ -1.49
TM9SF3Q9HD45 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.74□□□□□ -1.49
TM9SF3Q9HD45 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TM9SF3Q9HD45 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TM9SF3Q9HD45 AP000473.2-201ENST00000602659 1537 ntBASIC5.74□□□□□ -1.49
TM9SF3Q9HD45 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TM9SF3Q9HD45 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
TM9SF3Q9HD45 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 209.8 ms