Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC7.59□□□□□ -1.19
CHMP4AQ9BY43 RPL23AP19-201ENST00000436229 369 ntBASIC7.59□□□□□ -1.19
CHMP4AQ9BY43 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC7.59□□□□□ -1.19
CHMP4AQ9BY43 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC7.59□□□□□ -1.19
CHMP4AQ9BY43 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC7.59□□□□□ -1.19
CHMP4AQ9BY43 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CHMP4AQ9BY43 RNU1-88P-201ENST00000459274 128 ntBASIC7.59□□□□□ -1.19
CHMP4AQ9BY43 AL603882.1-201ENST00000463059 681 ntBASIC7.59□□□□□ -1.19
CHMP4AQ9BY43 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC7.59□□□□□ -1.19
CHMP4AQ9BY43 AC073610.1-201ENST00000489971 396 ntBASIC7.59□□□□□ -1.19
CHMP4AQ9BY43 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC7.59□□□□□ -1.19
CHMP4AQ9BY43 MTHFD2P4-201ENST00000515074 1025 ntBASIC7.59□□□□□ -1.19
CHMP4AQ9BY43 RN7SKP248-201ENST00000516278 305 ntBASIC7.59□□□□□ -1.19
CHMP4AQ9BY43 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
CHMP4AQ9BY43 CETN3-206ENST00000522864 738 ntTSL 3 BASIC7.59□□□□□ -1.19
CHMP4AQ9BY43 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC7.59□□□□□ -1.19
CHMP4AQ9BY43 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC7.59□□□□□ -1.19
CHMP4AQ9BY43 AGGF1P7-201ENST00000562369 913 ntBASIC7.59□□□□□ -1.19
CHMP4AQ9BY43 MIR132-201ENST00000591554 101 ntBASIC7.59□□□□□ -1.19
CHMP4AQ9BY43 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC7.59□□□□□ -1.19
CHMP4AQ9BY43 AC100767.2-201ENST00000604840 693 ntBASIC7.59□□□□□ -1.19
CHMP4AQ9BY43 FAM27E4-201ENST00000605259 342 ntBASIC7.59□□□□□ -1.19
CHMP4AQ9BY43 SNORA11.6-201ENST00000619030 128 ntBASIC7.59□□□□□ -1.19
CHMP4AQ9BY43 AC026367.3-201ENST00000619032 590 ntBASIC7.59□□□□□ -1.19
CHMP4AQ9BY43 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC7.59□□□□□ -1.19
CHMP4AQ9BY43 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
CHMP4AQ9BY43 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC7.59□□□□□ -1.19
CHMP4AQ9BY43 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CHMP4AQ9BY43 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CHMP4AQ9BY43 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC7.59□□□□□ -1.19
CHMP4AQ9BY43 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC7.59□□□□□ -1.2
CHMP4AQ9BY43 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
CHMP4AQ9BY43 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC7.59□□□□□ -1.2
CHMP4AQ9BY43 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.2
CHMP4AQ9BY43 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
CHMP4AQ9BY43 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC7.58□□□□□ -1.2
CHMP4AQ9BY43 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC7.58□□□□□ -1.2
CHMP4AQ9BY43 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC7.58□□□□□ -1.2
CHMP4AQ9BY43 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC7.58□□□□□ -1.2
CHMP4AQ9BY43 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CHMP4AQ9BY43 BX005019.1-201ENST00000561881 1810 ntBASIC7.58□□□□□ -1.2
CHMP4AQ9BY43 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CHMP4AQ9BY43 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
CHMP4AQ9BY43 RNA5-8SP5-201ENST00000365304 152 ntBASIC7.58□□□□□ -1.2
CHMP4AQ9BY43 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CHMP4AQ9BY43 RPL23AP17-201ENST00000401064 499 ntBASIC7.58□□□□□ -1.2
CHMP4AQ9BY43 AL607077.1-201ENST00000401718 499 ntBASIC7.58□□□□□ -1.2
CHMP4AQ9BY43 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC7.58□□□□□ -1.2
CHMP4AQ9BY43 PA2G4P6-201ENST00000438325 1197 ntBASIC7.58□□□□□ -1.2
CHMP4AQ9BY43 AL512637.1-201ENST00000439523 1231 ntBASIC7.58□□□□□ -1.2
CHMP4AQ9BY43 AC099063.2-201ENST00000446360 662 ntBASIC7.58□□□□□ -1.2
CHMP4AQ9BY43 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC7.58□□□□□ -1.2
CHMP4AQ9BY43 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CHMP4AQ9BY43 AL591363.1-201ENST00000450091 483 ntBASIC7.58□□□□□ -1.2
CHMP4AQ9BY43 AL445687.2-201ENST00000458156 728 ntBASIC7.58□□□□□ -1.2
CHMP4AQ9BY43 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC7.58□□□□□ -1.2
CHMP4AQ9BY43 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC7.58□□□□□ -1.2
CHMP4AQ9BY43 AL671862.1-201ENST00000515851 349 ntBASIC7.58□□□□□ -1.2
CHMP4AQ9BY43 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC7.58□□□□□ -1.2
CHMP4AQ9BY43 AL121594.2-201ENST00000541658 472 ntBASIC7.58□□□□□ -1.2
CHMP4AQ9BY43 AC006530.1-201ENST00000555980 571 ntBASIC7.58□□□□□ -1.2
CHMP4AQ9BY43 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC7.58□□□□□ -1.2
CHMP4AQ9BY43 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC7.58□□□□□ -1.2
CHMP4AQ9BY43 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC7.58□□□□□ -1.2
CHMP4AQ9BY43 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC7.58□□□□□ -1.2
CHMP4AQ9BY43 AC145207.9-201ENST00000623802 325 ntBASIC7.58□□□□□ -1.2
CHMP4AQ9BY43 AC019080.5-201ENST00000624891 757 ntBASIC7.58□□□□□ -1.2
CHMP4AQ9BY43 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC7.58□□□□□ -1.2
CHMP4AQ9BY43 AC106872.5-201ENST00000508856 1416 ntBASIC7.58□□□□□ -1.2
CHMP4AQ9BY43 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CHMP4AQ9BY43 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
CHMP4AQ9BY43 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
CHMP4AQ9BY43 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CHMP4AQ9BY43 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC7.58□□□□□ -1.2
CHMP4AQ9BY43 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC7.58□□□□□ -1.2
CHMP4AQ9BY43 AC130304.1-201ENST00000622942 2385 ntBASIC7.57□□□□□ -1.2
CHMP4AQ9BY43 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC7.57□□□□□ -1.2
CHMP4AQ9BY43 AC092724.1-201ENST00000624623 3397 ntBASIC7.57□□□□□ -1.2
CHMP4AQ9BY43 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC7.57□□□□□ -1.2
CHMP4AQ9BY43 FBXL21-201ENST00000297158 1305 ntBASIC7.57□□□□□ -1.2
CHMP4AQ9BY43 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CHMP4AQ9BY43 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC7.57□□□□□ -1.2
CHMP4AQ9BY43 AC015799.1-201ENST00000622996 3122 ntBASIC7.57□□□□□ -1.2
CHMP4AQ9BY43 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CHMP4AQ9BY43 OR52B3P-201ENST00000314715 928 ntBASIC7.57□□□□□ -1.2
CHMP4AQ9BY43 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CHMP4AQ9BY43 MIR375-201ENST00000362103 64 ntBASIC7.57□□□□□ -1.2
CHMP4AQ9BY43 RNA5SP435-201ENST00000364044 108 ntBASIC7.57□□□□□ -1.2
CHMP4AQ9BY43 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC7.57□□□□□ -1.2
CHMP4AQ9BY43 RNU6-178P-201ENST00000384631 104 ntBASIC7.57□□□□□ -1.2
CHMP4AQ9BY43 AL096800.1-201ENST00000405326 893 ntBASIC7.57□□□□□ -1.2
CHMP4AQ9BY43 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC7.57□□□□□ -1.2
CHMP4AQ9BY43 AL512504.1-201ENST00000415494 778 ntBASIC7.57□□□□□ -1.2
CHMP4AQ9BY43 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC7.57□□□□□ -1.2
CHMP4AQ9BY43 MRPS21P2-201ENST00000424704 264 ntBASIC7.57□□□□□ -1.2
CHMP4AQ9BY43 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC7.57□□□□□ -1.2
CHMP4AQ9BY43 AC126120.1-201ENST00000431082 470 ntBASIC7.57□□□□□ -1.2
CHMP4AQ9BY43 AL663074.2-201ENST00000440621 479 ntBASIC7.57□□□□□ -1.2
CHMP4AQ9BY43 HLA-DPA3-207ENST00000454398 229 ntBASIC7.57□□□□□ -1.2
CHMP4AQ9BY43 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC7.57□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms