Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AP005403.1-201ENST00000579720 229 ntBASIC8.22□□□□□ -1.09
SCAPERQ9BY12 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC8.22□□□□□ -1.09
SCAPERQ9BY12 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC8.22□□□□□ -1.09
SCAPERQ9BY12 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
SCAPERQ9BY12 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC8.22□□□□□ -1.09
SCAPERQ9BY12 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC8.22□□□□□ -1.09
SCAPERQ9BY12 LRRC37A16P-202ENST00000586022 3725 ntBASIC8.22□□□□□ -1.09
SCAPERQ9BY12 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
SCAPERQ9BY12 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
SCAPERQ9BY12 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SCAPERQ9BY12 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SCAPERQ9BY12 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
SCAPERQ9BY12 RNA5SP326-201ENST00000363209 110 ntBASIC8.21□□□□□ -1.09
SCAPERQ9BY12 RNU1-32P-201ENST00000363937 159 ntBASIC8.21□□□□□ -1.09
SCAPERQ9BY12 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
SCAPERQ9BY12 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.09
SCAPERQ9BY12 RPS17P17-201ENST00000419392 409 ntBASIC8.21□□□□□ -1.09
SCAPERQ9BY12 MIPEPP2-201ENST00000422560 1819 ntBASIC8.21□□□□□ -1.09
SCAPERQ9BY12 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC8.21□□□□□ -1.09
SCAPERQ9BY12 NANOGP9-201ENST00000439890 892 ntBASIC8.21□□□□□ -1.09
SCAPERQ9BY12 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC8.21□□□□□ -1.09
SCAPERQ9BY12 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.09
SCAPERQ9BY12 RPL7P16-201ENST00000479738 738 ntBASIC8.21□□□□□ -1.09
SCAPERQ9BY12 PMS2P3-207ENST00000529061 717 ntBASIC8.21□□□□□ -1.09
SCAPERQ9BY12 AL512310.9-201ENST00000553311 948 ntBASIC8.21□□□□□ -1.09
SCAPERQ9BY12 AC073869.10-201ENST00000642016 354 ntBASIC8.21□□□□□ -1.09
SCAPERQ9BY12 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC8.21□□□□□ -1.09
SCAPERQ9BY12 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC8.21□□□□□ -1.09
SCAPERQ9BY12 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
SCAPERQ9BY12 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC8.21□□□□□ -1.1
SCAPERQ9BY12 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
SCAPERQ9BY12 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
SCAPERQ9BY12 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC8.21□□□□□ -1.1
SCAPERQ9BY12 API5-210ENST00000534600 1760 ntTSL 5 BASIC8.21□□□□□ -1.1
SCAPERQ9BY12 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC8.21□□□□□ -1.1
SCAPERQ9BY12 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC8.21□□□□□ -1.1
SCAPERQ9BY12 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC8.21□□□□□ -1.1
SCAPERQ9BY12 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
SCAPERQ9BY12 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
SCAPERQ9BY12 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
SCAPERQ9BY12 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC8.21□□□□□ -1.1
SCAPERQ9BY12 RN7SKP113-201ENST00000363891 295 ntBASIC8.2□□□□□ -1.1
SCAPERQ9BY12 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC8.2□□□□□ -1.1
SCAPERQ9BY12 RPSAP35-201ENST00000413753 818 ntBASIC8.2□□□□□ -1.1
SCAPERQ9BY12 ATP6V1G1P7-201ENST00000415853 349 ntBASIC8.2□□□□□ -1.1
SCAPERQ9BY12 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC8.2□□□□□ -1.1
SCAPERQ9BY12 AC079080.1-201ENST00000479841 822 ntBASIC8.2□□□□□ -1.1
SCAPERQ9BY12 IGHVII-44-2-201ENST00000517728 250 ntBASIC8.2□□□□□ -1.1
SCAPERQ9BY12 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC8.2□□□□□ -1.1
SCAPERQ9BY12 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC8.2□□□□□ -1.1
SCAPERQ9BY12 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC8.2□□□□□ -1.1
SCAPERQ9BY12 AC068790.4-201ENST00000602474 263 ntBASIC8.2□□□□□ -1.1
SCAPERQ9BY12 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
SCAPERQ9BY12 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
SCAPERQ9BY12 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC8.2□□□□□ -1.1
SCAPERQ9BY12 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
SCAPERQ9BY12 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC8.2□□□□□ -1.1
SCAPERQ9BY12 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC8.2□□□□□ -1.1
SCAPERQ9BY12 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
SCAPERQ9BY12 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
SCAPERQ9BY12 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC8.2□□□□□ -1.1
SCAPERQ9BY12 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC8.2□□□□□ -1.1
SCAPERQ9BY12 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
SCAPERQ9BY12 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
SCAPERQ9BY12 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
SCAPERQ9BY12 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
SCAPERQ9BY12 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
SCAPERQ9BY12 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
SCAPERQ9BY12 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC8.2□□□□□ -1.1
SCAPERQ9BY12 RN7SKP149-201ENST00000363008 344 ntBASIC8.2□□□□□ -1.1
SCAPERQ9BY12 AC008072.1-201ENST00000434254 824 ntBASIC8.2□□□□□ -1.1
SCAPERQ9BY12 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC8.2□□□□□ -1.1
SCAPERQ9BY12 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC8.2□□□□□ -1.1
SCAPERQ9BY12 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
SCAPERQ9BY12 AL163952.1-202ENST00000569625 600 ntBASIC8.2□□□□□ -1.1
SCAPERQ9BY12 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC8.2□□□□□ -1.1
SCAPERQ9BY12 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
SCAPERQ9BY12 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
SCAPERQ9BY12 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SCAPERQ9BY12 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
SCAPERQ9BY12 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SCAPERQ9BY12 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
SCAPERQ9BY12 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SCAPERQ9BY12 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SCAPERQ9BY12 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC8.19□□□□□ -1.1
SCAPERQ9BY12 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SCAPERQ9BY12 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
SCAPERQ9BY12 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SCAPERQ9BY12 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
SCAPERQ9BY12 AC009779.8-201ENST00000641684 4384 ntBASIC8.19□□□□□ -1.1
SCAPERQ9BY12 AL034549.2-201ENST00000618285 3373 ntBASIC8.19□□□□□ -1.1
SCAPERQ9BY12 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
SCAPERQ9BY12 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
SCAPERQ9BY12 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
SCAPERQ9BY12 THAP12P4-201ENST00000528321 2266 ntBASIC8.19□□□□□ -1.1
SCAPERQ9BY12 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
SCAPERQ9BY12 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SCAPERQ9BY12 RN7SKP95-201ENST00000362860 303 ntBASIC8.19□□□□□ -1.1
SCAPERQ9BY12 RNU1-146P-201ENST00000364015 165 ntBASIC8.19□□□□□ -1.1
SCAPERQ9BY12 RNA5-8SP5-201ENST00000365304 152 ntBASIC8.19□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms