Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 CASC19-281ENST00000642118 1554 ntBASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 AP005139.1-201ENST00000580702 1647 ntBASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 RNA5SP65-201ENST00000363166 119 ntBASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 RN7SKP275-201ENST00000364626 301 ntBASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 RN7SKP81-201ENST00000365603 331 ntBASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 AL035422.1-201ENST00000414193 397 ntBASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 NEK4P1-201ENST00000433383 879 ntBASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 GTF2IP14-201ENST00000441415 586 ntBASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 AC011742.2-201ENST00000443818 352 ntBASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 RPL5P7-201ENST00000444235 813 ntBASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 MTCYBP3-201ENST00000445588 1137 ntBASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 RN7SL254P-201ENST00000460609 284 ntBASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 BZW1P2-201ENST00000473537 826 ntBASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 RN7SL174P-201ENST00000475578 289 ntBASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 AC112184.1-201ENST00000505179 312 ntBASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 RNU6ATAC39P-201ENST00000516309 149 ntBASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 AP006245.2-201ENST00000522004 300 ntBASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 AC023968.1-201ENST00000560719 475 ntBASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 AC106785.4-201ENST00000569492 412 ntBASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 RBM22P1-201ENST00000578589 1214 ntBASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 AP003465.2-201ENST00000602571 373 ntBASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 AC087241.4-201ENST00000612441 480 ntBASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 AC092794.1-201ENST00000612734 582 ntBASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 AC073968.1-201ENST00000618594 637 ntBASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 VN1R7P-201ENST00000619242 903 ntBASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 AC131009.3-201ENST00000621809 287 ntBASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 CCL14-204ENST00000622526 472 ntTSL 3 BASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 AC120057.5-201ENST00000623840 154 ntBASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 AP003400.5-201ENST00000624827 617 ntBASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
SYNGAP1Q96PV0 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
SYNGAP1Q96PV0 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
SYNGAP1Q96PV0 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
SYNGAP1Q96PV0 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
SYNGAP1Q96PV0 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
SYNGAP1Q96PV0 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC7.47□□□□□ -1.21
SYNGAP1Q96PV0 NEK2P4-201ENST00000425793 1329 ntBASIC7.47□□□□□ -1.21
SYNGAP1Q96PV0 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC7.47□□□□□ -1.21
SYNGAP1Q96PV0 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SYNGAP1Q96PV0 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SYNGAP1Q96PV0 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
SYNGAP1Q96PV0 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC7.47□□□□□ -1.21
SYNGAP1Q96PV0 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SYNGAP1Q96PV0 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC7.47□□□□□ -1.21
SYNGAP1Q96PV0 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
SYNGAP1Q96PV0 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
SYNGAP1Q96PV0 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SYNGAP1Q96PV0 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
SYNGAP1Q96PV0 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC7.47□□□□□ -1.21
SYNGAP1Q96PV0 RNU6-697P-201ENST00000363348 107 ntBASIC7.47□□□□□ -1.21
SYNGAP1Q96PV0 U6.112-201ENST00000384129 70 ntBASIC7.47□□□□□ -1.21
SYNGAP1Q96PV0 RNU6-1005P-201ENST00000384519 107 ntBASIC7.47□□□□□ -1.21
SYNGAP1Q96PV0 AC017035.1-201ENST00000411999 1115 ntBASIC7.47□□□□□ -1.21
SYNGAP1Q96PV0 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC7.47□□□□□ -1.21
SYNGAP1Q96PV0 DUTP4-201ENST00000424782 475 ntBASIC7.47□□□□□ -1.21
SYNGAP1Q96PV0 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC7.47□□□□□ -1.21
SYNGAP1Q96PV0 MTATP6P23-201ENST00000440153 476 ntBASIC7.47□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms