Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC5.97□□□□□ -1.45
VPS50Q96JG6 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.97□□□□□ -1.45
VPS50Q96JG6 AC005242.1-201ENST00000585658 438 ntBASIC5.97□□□□□ -1.45
VPS50Q96JG6 AC068620.3-201ENST00000602749 560 ntBASIC5.97□□□□□ -1.45
VPS50Q96JG6 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.97□□□□□ -1.45
VPS50Q96JG6 AC018926.1-201ENST00000616335 435 ntBASIC5.97□□□□□ -1.45
VPS50Q96JG6 MIR1264-201ENST00000616374 69 ntBASIC5.97□□□□□ -1.45
VPS50Q96JG6 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
VPS50Q96JG6 AC097520.1-201ENST00000624435 385 ntBASIC5.97□□□□□ -1.45
VPS50Q96JG6 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.97□□□□□ -1.45
VPS50Q96JG6 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
VPS50Q96JG6 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
VPS50Q96JG6 MAPK10-338ENST00000641647 3362 ntBASIC5.97□□□□□ -1.45
VPS50Q96JG6 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
VPS50Q96JG6 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.97□□□□□ -1.45
VPS50Q96JG6 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
VPS50Q96JG6 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
VPS50Q96JG6 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
VPS50Q96JG6 KYNUP3-201ENST00000574386 1341 ntBASIC5.97□□□□□ -1.45
VPS50Q96JG6 AL627171.1-201ENST00000618845 1308 ntBASIC5.97□□□□□ -1.45
VPS50Q96JG6 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.97□□□□□ -1.45
VPS50Q96JG6 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
VPS50Q96JG6 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
VPS50Q96JG6 AL353743.3-201ENST00000442109 1468 ntBASIC5.96□□□□□ -1.45
VPS50Q96JG6 AL121768.1-201ENST00000613917 2544 ntBASIC5.96□□□□□ -1.45
VPS50Q96JG6 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
VPS50Q96JG6 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
VPS50Q96JG6 QRSL1P1-201ENST00000400977 1540 ntBASIC5.96□□□□□ -1.46
VPS50Q96JG6 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
VPS50Q96JG6 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.96□□□□□ -1.46
VPS50Q96JG6 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
VPS50Q96JG6 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
VPS50Q96JG6 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
VPS50Q96JG6 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
VPS50Q96JG6 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.96□□□□□ -1.46
VPS50Q96JG6 Z86062.1-201ENST00000406773 777 ntBASIC5.96□□□□□ -1.46
VPS50Q96JG6 MIR1282-201ENST00000408865 101 ntBASIC5.96□□□□□ -1.46
VPS50Q96JG6 DHFRP2-201ENST00000414224 547 ntBASIC5.96□□□□□ -1.46
VPS50Q96JG6 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.96□□□□□ -1.46
VPS50Q96JG6 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.96□□□□□ -1.46
VPS50Q96JG6 AC234781.4-201ENST00000419384 244 ntBASIC5.96□□□□□ -1.46
VPS50Q96JG6 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.96□□□□□ -1.46
VPS50Q96JG6 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.96□□□□□ -1.46
VPS50Q96JG6 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.96□□□□□ -1.46
VPS50Q96JG6 MTATP6P17-201ENST00000431030 672 ntBASIC5.96□□□□□ -1.46
VPS50Q96JG6 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.96□□□□□ -1.46
VPS50Q96JG6 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
VPS50Q96JG6 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.96□□□□□ -1.46
VPS50Q96JG6 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.96□□□□□ -1.46
VPS50Q96JG6 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.96□□□□□ -1.46
VPS50Q96JG6 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.96□□□□□ -1.46
VPS50Q96JG6 RFPL4AP3-201ENST00000515267 345 ntBASIC5.96□□□□□ -1.46
VPS50Q96JG6 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.96□□□□□ -1.46
VPS50Q96JG6 COX6B1P4-201ENST00000519826 484 ntBASIC5.96□□□□□ -1.46
VPS50Q96JG6 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
VPS50Q96JG6 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.96□□□□□ -1.46
VPS50Q96JG6 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.96□□□□□ -1.46
VPS50Q96JG6 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
VPS50Q96JG6 GLYATL1P2-202ENST00000588046 902 ntBASIC5.96□□□□□ -1.46
VPS50Q96JG6 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.96□□□□□ -1.46
VPS50Q96JG6 AL499605.1-201ENST00000604628 403 ntBASIC5.96□□□□□ -1.46
VPS50Q96JG6 AC069234.4-201ENST00000621276 412 ntBASIC5.96□□□□□ -1.46
VPS50Q96JG6 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
VPS50Q96JG6 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.96□□□□□ -1.46
VPS50Q96JG6 AC116667.2-201ENST00000641075 823 ntBASIC5.96□□□□□ -1.46
VPS50Q96JG6 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
VPS50Q96JG6 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
VPS50Q96JG6 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
VPS50Q96JG6 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
VPS50Q96JG6 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
VPS50Q96JG6 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
VPS50Q96JG6 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
VPS50Q96JG6 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
VPS50Q96JG6 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
VPS50Q96JG6 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
VPS50Q96JG6 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.96□□□□□ -1.46
VPS50Q96JG6 AL645568.2-201ENST00000432815 1337 ntBASIC5.96□□□□□ -1.46
VPS50Q96JG6 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.96□□□□□ -1.46
VPS50Q96JG6 AC104966.1-201ENST00000467010 1464 ntBASIC5.96□□□□□ -1.46
VPS50Q96JG6 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
VPS50Q96JG6 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.95□□□□□ -1.46
VPS50Q96JG6 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.95□□□□□ -1.46
VPS50Q96JG6 TCP11X1-202ENST00000622971 1372 ntBASIC5.95□□□□□ -1.46
VPS50Q96JG6 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.95□□□□□ -1.46
VPS50Q96JG6 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
VPS50Q96JG6 ADAM24P-201ENST00000398655 2101 ntBASIC5.95□□□□□ -1.46
VPS50Q96JG6 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.95□□□□□ -1.46
VPS50Q96JG6 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
VPS50Q96JG6 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
VPS50Q96JG6 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
VPS50Q96JG6 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.95□□□□□ -1.46
VPS50Q96JG6 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
VPS50Q96JG6 AC016027.5-201ENST00000427227 210 ntBASIC5.95□□□□□ -1.46
VPS50Q96JG6 AC007679.3-201ENST00000434035 414 ntBASIC5.95□□□□□ -1.46
VPS50Q96JG6 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.95□□□□□ -1.46
VPS50Q96JG6 AC016908.1-201ENST00000442571 1219 ntBASIC5.95□□□□□ -1.46
VPS50Q96JG6 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.95□□□□□ -1.46
VPS50Q96JG6 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.95□□□□□ -1.46
VPS50Q96JG6 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.95□□□□□ -1.46
VPS50Q96JG6 RPL12P31-201ENST00000478433 450 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms