Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
ECHDC3Q96DC8 AC022467.1-201ENST00000614738 749 ntBASIC5.55□□□□□ -1.52
ECHDC3Q96DC8 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
ECHDC3Q96DC8 AC123769.1-201ENST00000530992 3192 ntBASIC5.55□□□□□ -1.52
ECHDC3Q96DC8 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
ECHDC3Q96DC8 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
ECHDC3Q96DC8 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.55□□□□□ -1.52
ECHDC3Q96DC8 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
ECHDC3Q96DC8 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
ECHDC3Q96DC8 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.55□□□□□ -1.52
ECHDC3Q96DC8 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.55□□□□□ -1.52
ECHDC3Q96DC8 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
ECHDC3Q96DC8 AL137058.3-201ENST00000624531 3099 ntBASIC5.54□□□□□ -1.52
ECHDC3Q96DC8 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
ECHDC3Q96DC8 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.54□□□□□ -1.52
ECHDC3Q96DC8 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
ECHDC3Q96DC8 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
ECHDC3Q96DC8 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
ECHDC3Q96DC8 SNORA51.1-201ENST00000363243 140 ntBASIC5.54□□□□□ -1.52
ECHDC3Q96DC8 TRAV35-201ENST00000390462 330 ntBASIC5.54□□□□□ -1.52
ECHDC3Q96DC8 RN7SKP17-201ENST00000411242 351 ntBASIC5.54□□□□□ -1.52
ECHDC3Q96DC8 RPSAP35-201ENST00000413753 818 ntBASIC5.54□□□□□ -1.52
ECHDC3Q96DC8 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.54□□□□□ -1.52
ECHDC3Q96DC8 Z93019.1-201ENST00000416450 973 ntBASIC5.54□□□□□ -1.52
ECHDC3Q96DC8 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.54□□□□□ -1.52
ECHDC3Q96DC8 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.54□□□□□ -1.52
ECHDC3Q96DC8 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.54□□□□□ -1.52
ECHDC3Q96DC8 SPRYD7P1-201ENST00000443861 570 ntBASIC5.54□□□□□ -1.52
ECHDC3Q96DC8 LINC02210-201ENST00000444561 288 ntBASIC5.54□□□□□ -1.52
ECHDC3Q96DC8 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.54□□□□□ -1.52
ECHDC3Q96DC8 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.54□□□□□ -1.52
ECHDC3Q96DC8 RN7SL547P-201ENST00000490793 290 ntBASIC5.54□□□□□ -1.52
ECHDC3Q96DC8 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC5.54□□□□□ -1.52
ECHDC3Q96DC8 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.54□□□□□ -1.52
ECHDC3Q96DC8 AC078878.1-201ENST00000539832 958 ntBASIC5.54□□□□□ -1.52
ECHDC3Q96DC8 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.54□□□□□ -1.52
ECHDC3Q96DC8 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.54□□□□□ -1.52
ECHDC3Q96DC8 AC107993.1-201ENST00000591343 684 ntBASIC5.54□□□□□ -1.52
ECHDC3Q96DC8 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.54□□□□□ -1.52
ECHDC3Q96DC8 SUGT1P3-202ENST00000604259 383 ntBASIC5.54□□□□□ -1.52
ECHDC3Q96DC8 AC000068.2-201ENST00000608816 460 ntBASIC5.54□□□□□ -1.52
ECHDC3Q96DC8 AC079395.2-201ENST00000610982 737 ntBASIC5.54□□□□□ -1.52
ECHDC3Q96DC8 AL359513.1-201ENST00000614364 557 ntBASIC5.54□□□□□ -1.52
ECHDC3Q96DC8 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.54□□□□□ -1.52
ECHDC3Q96DC8 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.54□□□□□ -1.52
ECHDC3Q96DC8 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
ECHDC3Q96DC8 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
ECHDC3Q96DC8 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
ECHDC3Q96DC8 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.54□□□□□ -1.52
ECHDC3Q96DC8 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
ECHDC3Q96DC8 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
ECHDC3Q96DC8 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.53□□□□□ -1.52
ECHDC3Q96DC8 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.53□□□□□ -1.52
ECHDC3Q96DC8 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
ECHDC3Q96DC8 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
ECHDC3Q96DC8 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
ECHDC3Q96DC8 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.53□□□□□ -1.52
ECHDC3Q96DC8 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
ECHDC3Q96DC8 AL355488.2-201ENST00000609909 2850 ntBASIC5.53□□□□□ -1.52
ECHDC3Q96DC8 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
ECHDC3Q96DC8 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
ECHDC3Q96DC8 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
ECHDC3Q96DC8 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
ECHDC3Q96DC8 AL391361.1-201ENST00000405580 489 ntBASIC5.53□□□□□ -1.52
ECHDC3Q96DC8 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.53□□□□□ -1.52
ECHDC3Q96DC8 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.53□□□□□ -1.52
ECHDC3Q96DC8 PRUNEP1-201ENST00000425846 705 ntBASIC5.53□□□□□ -1.52
ECHDC3Q96DC8 AC073072.2-201ENST00000447425 348 ntBASIC5.53□□□□□ -1.52
ECHDC3Q96DC8 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.53□□□□□ -1.52
ECHDC3Q96DC8 AC007386.1-201ENST00000455212 582 ntBASIC5.53□□□□□ -1.52
ECHDC3Q96DC8 AC011225.1-201ENST00000457751 369 ntBASIC5.53□□□□□ -1.52
ECHDC3Q96DC8 RN7SL188P-201ENST00000469842 285 ntBASIC5.53□□□□□ -1.52
ECHDC3Q96DC8 AC021106.1-201ENST00000509020 1058 ntBASIC5.53□□□□□ -1.52
ECHDC3Q96DC8 RPL7L1P4-201ENST00000513004 707 ntBASIC5.53□□□□□ -1.52
ECHDC3Q96DC8 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
ECHDC3Q96DC8 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC5.53□□□□□ -1.52
ECHDC3Q96DC8 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.53□□□□□ -1.52
ECHDC3Q96DC8 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.53□□□□□ -1.52
ECHDC3Q96DC8 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.53□□□□□ -1.52
ECHDC3Q96DC8 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
ECHDC3Q96DC8 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.53□□□□□ -1.52
ECHDC3Q96DC8 AC109309.2-201ENST00000612597 332 ntBASIC5.53□□□□□ -1.52
ECHDC3Q96DC8 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
ECHDC3Q96DC8 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.53□□□□□ -1.52
ECHDC3Q96DC8 AC000095.2-202ENST00000637415 154 ntBASIC5.53□□□□□ -1.52
ECHDC3Q96DC8 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
ECHDC3Q96DC8 AC079776.5-201ENST00000641920 211 ntBASIC5.53□□□□□ -1.52
ECHDC3Q96DC8 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
ECHDC3Q96DC8 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
ECHDC3Q96DC8 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
ECHDC3Q96DC8 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
ECHDC3Q96DC8 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
ECHDC3Q96DC8 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
ECHDC3Q96DC8 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
ECHDC3Q96DC8 AC025470.1-201ENST00000510053 2032 ntBASIC5.53□□□□□ -1.52
ECHDC3Q96DC8 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
ECHDC3Q96DC8 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
ECHDC3Q96DC8 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
ECHDC3Q96DC8 AC005261.6-201ENST00000623072 1387 ntBASIC5.53□□□□□ -1.52
ECHDC3Q96DC8 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms