Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.55□□□□□ -1.52
VPS33AQ96AX1 GUSBP9-201ENST00000510138 584 ntBASIC5.55□□□□□ -1.52
VPS33AQ96AX1 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS33AQ96AX1 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.55□□□□□ -1.52
VPS33AQ96AX1 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS33AQ96AX1 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS33AQ96AX1 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.55□□□□□ -1.52
VPS33AQ96AX1 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS33AQ96AX1 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS33AQ96AX1 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS33AQ96AX1 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.55□□□□□ -1.52
VPS33AQ96AX1 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.55□□□□□ -1.52
VPS33AQ96AX1 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC5.55□□□□□ -1.52
VPS33AQ96AX1 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.55□□□□□ -1.52
VPS33AQ96AX1 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.55□□□□□ -1.52
VPS33AQ96AX1 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS33AQ96AX1 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.55□□□□□ -1.52
VPS33AQ96AX1 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS33AQ96AX1 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS33AQ96AX1 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.55□□□□□ -1.52
VPS33AQ96AX1 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.55□□□□□ -1.52
VPS33AQ96AX1 AC034236.3-201ENST00000605999 461 ntBASIC5.55□□□□□ -1.52
VPS33AQ96AX1 AC074276.2-201ENST00000619891 348 ntBASIC5.55□□□□□ -1.52
VPS33AQ96AX1 LINC00216-201ENST00000623548 1126 ntBASIC5.55□□□□□ -1.52
VPS33AQ96AX1 AC004808.2-201ENST00000627965 773 ntBASIC5.55□□□□□ -1.52
VPS33AQ96AX1 OR11H2-202ENST00000641517 1085 ntBASIC5.55□□□□□ -1.52
VPS33AQ96AX1 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
VPS33AQ96AX1 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VPS33AQ96AX1 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VPS33AQ96AX1 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VPS33AQ96AX1 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VPS33AQ96AX1 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VPS33AQ96AX1 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VPS33AQ96AX1 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.55□□□□□ -1.52
VPS33AQ96AX1 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VPS33AQ96AX1 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
VPS33AQ96AX1 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VPS33AQ96AX1 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VPS33AQ96AX1 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
VPS33AQ96AX1 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.54□□□□□ -1.52
VPS33AQ96AX1 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VPS33AQ96AX1 PSG10P-201ENST00000501199 1500 ntBASIC5.54□□□□□ -1.52
VPS33AQ96AX1 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
VPS33AQ96AX1 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
VPS33AQ96AX1 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.54□□□□□ -1.52
VPS33AQ96AX1 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.54□□□□□ -1.52
VPS33AQ96AX1 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VPS33AQ96AX1 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VPS33AQ96AX1 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
VPS33AQ96AX1 MAPK10-328ENST00000641553 4009 ntBASIC5.54□□□□□ -1.52
VPS33AQ96AX1 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
VPS33AQ96AX1 SELENOWP1-201ENST00000322792 252 ntBASIC5.54□□□□□ -1.52
VPS33AQ96AX1 RN7SKP69-201ENST00000365390 305 ntBASIC5.54□□□□□ -1.52
VPS33AQ96AX1 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VPS33AQ96AX1 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.54□□□□□ -1.52
VPS33AQ96AX1 RPL35AP3-201ENST00000414680 288 ntBASIC5.54□□□□□ -1.52
VPS33AQ96AX1 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC5.54□□□□□ -1.52
VPS33AQ96AX1 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.54□□□□□ -1.52
VPS33AQ96AX1 AC015983.1-201ENST00000441577 373 ntBASIC5.54□□□□□ -1.52
VPS33AQ96AX1 AL445466.1-201ENST00000448432 357 ntBASIC5.54□□□□□ -1.52
VPS33AQ96AX1 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.54□□□□□ -1.52
VPS33AQ96AX1 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.54□□□□□ -1.52
VPS33AQ96AX1 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC5.54□□□□□ -1.52
VPS33AQ96AX1 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC5.54□□□□□ -1.52
VPS33AQ96AX1 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.54□□□□□ -1.52
VPS33AQ96AX1 RN7SL269P-201ENST00000467795 305 ntBASIC5.54□□□□□ -1.52
VPS33AQ96AX1 AC023245.1-201ENST00000468501 517 ntBASIC5.54□□□□□ -1.52
VPS33AQ96AX1 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.54□□□□□ -1.52
VPS33AQ96AX1 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.54□□□□□ -1.52
VPS33AQ96AX1 FABP5P6-201ENST00000510588 409 ntBASIC5.54□□□□□ -1.52
VPS33AQ96AX1 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.54□□□□□ -1.52
VPS33AQ96AX1 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC5.54□□□□□ -1.52
VPS33AQ96AX1 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
VPS33AQ96AX1 AC034244.2-201ENST00000514668 858 ntBASIC5.54□□□□□ -1.52
VPS33AQ96AX1 GAPDHP62-201ENST00000515313 990 ntBASIC5.54□□□□□ -1.52
VPS33AQ96AX1 AC016550.3-201ENST00000515706 767 ntBASIC5.54□□□□□ -1.52
VPS33AQ96AX1 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.54□□□□□ -1.52
VPS33AQ96AX1 IGHV3-63-201ENST00000518422 341 ntBASIC5.54□□□□□ -1.52
VPS33AQ96AX1 AC138832.1-201ENST00000522871 556 ntBASIC5.54□□□□□ -1.52
VPS33AQ96AX1 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.54□□□□□ -1.52
VPS33AQ96AX1 EIF4A2P5-201ENST00000529914 499 ntBASIC5.54□□□□□ -1.52
VPS33AQ96AX1 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.54□□□□□ -1.52
VPS33AQ96AX1 OR4A43P-201ENST00000532938 908 ntBASIC5.54□□□□□ -1.52
VPS33AQ96AX1 OR8X1P-201ENST00000534542 869 ntBASIC5.54□□□□□ -1.52
VPS33AQ96AX1 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.54□□□□□ -1.52
VPS33AQ96AX1 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC5.54□□□□□ -1.52
VPS33AQ96AX1 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.54□□□□□ -1.52
VPS33AQ96AX1 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.54□□□□□ -1.52
VPS33AQ96AX1 AC022001.1-201ENST00000605193 268 ntBASIC5.54□□□□□ -1.52
VPS33AQ96AX1 Z95327.3-201ENST00000610385 572 ntBASIC5.54□□□□□ -1.52
VPS33AQ96AX1 AL135999.3-201ENST00000610501 812 ntBASIC5.54□□□□□ -1.52
VPS33AQ96AX1 AL118556.2-201ENST00000614375 824 ntBASIC5.54□□□□□ -1.52
VPS33AQ96AX1 AC107308.1-201ENST00000615897 301 ntBASIC5.54□□□□□ -1.52
VPS33AQ96AX1 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
VPS33AQ96AX1 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.54□□□□□ -1.52
VPS33AQ96AX1 AC006840.1-201ENST00000623069 542 ntBASIC5.54□□□□□ -1.52
VPS33AQ96AX1 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.54□□□□□ -1.52
VPS33AQ96AX1 AC073488.3-201ENST00000631611 778 ntBASIC5.54□□□□□ -1.52
VPS33AQ96AX1 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.54□□□□□ -1.52
VPS33AQ96AX1 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 166 ms