Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.61□□□□□ -1.35
SNED1Q8TER0 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
SNED1Q8TER0 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SNED1Q8TER0 DBIP1-201ENST00000401435 260 ntBASIC6.61□□□□□ -1.35
SNED1Q8TER0 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SNED1Q8TER0 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.61□□□□□ -1.35
SNED1Q8TER0 USP9YP9-201ENST00000429406 715 ntBASIC6.61□□□□□ -1.35
SNED1Q8TER0 KRT8P51-201ENST00000438938 274 ntBASIC6.61□□□□□ -1.35
SNED1Q8TER0 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC6.61□□□□□ -1.35
SNED1Q8TER0 AL451063.1-201ENST00000450164 1133 ntBASIC6.61□□□□□ -1.35
SNED1Q8TER0 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC6.61□□□□□ -1.35
SNED1Q8TER0 AC002075.1-201ENST00000457396 676 ntBASIC6.61□□□□□ -1.35
SNED1Q8TER0 AC096741.1-201ENST00000472250 846 ntBASIC6.61□□□□□ -1.35
SNED1Q8TER0 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC6.61□□□□□ -1.35
SNED1Q8TER0 AC098799.1-201ENST00000504752 800 ntBASIC6.61□□□□□ -1.35
SNED1Q8TER0 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC6.61□□□□□ -1.35
SNED1Q8TER0 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC6.61□□□□□ -1.35
SNED1Q8TER0 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC6.61□□□□□ -1.35
SNED1Q8TER0 PCNPP1-201ENST00000552501 511 ntBASIC6.61□□□□□ -1.35
SNED1Q8TER0 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC6.61□□□□□ -1.35
SNED1Q8TER0 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC6.61□□□□□ -1.35
SNED1Q8TER0 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC6.61□□□□□ -1.35
SNED1Q8TER0 AL353662.3-201ENST00000625131 237 ntBASIC6.61□□□□□ -1.35
SNED1Q8TER0 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC6.61□□□□□ -1.35
SNED1Q8TER0 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
SNED1Q8TER0 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC6.61□□□□□ -1.35
SNED1Q8TER0 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SNED1Q8TER0 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SNED1Q8TER0 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SNED1Q8TER0 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SNED1Q8TER0 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
SNED1Q8TER0 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
SNED1Q8TER0 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SNED1Q8TER0 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SNED1Q8TER0 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.61□□□□□ -1.35
SNED1Q8TER0 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SNED1Q8TER0 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SNED1Q8TER0 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SNED1Q8TER0 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SNED1Q8TER0 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
SNED1Q8TER0 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.6□□□□□ -1.35
SNED1Q8TER0 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.6□□□□□ -1.35
SNED1Q8TER0 AP004289.1-201ENST00000436307 2205 ntBASIC6.6□□□□□ -1.35
SNED1Q8TER0 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SNED1Q8TER0 AC126755.2-208ENST00000327792 462 ntBASIC6.6□□□□□ -1.35
SNED1Q8TER0 AC138969.1-213ENST00000331436 462 ntBASIC6.6□□□□□ -1.35
SNED1Q8TER0 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
SNED1Q8TER0 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SNED1Q8TER0 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SNED1Q8TER0 AC211486.3-201ENST00000412694 621 ntBASIC6.6□□□□□ -1.35
SNED1Q8TER0 AC245028.1-201ENST00000423259 256 ntBASIC6.6□□□□□ -1.35
SNED1Q8TER0 AC009127.1-201ENST00000467090 155 ntBASIC6.6□□□□□ -1.35
SNED1Q8TER0 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.6□□□□□ -1.35
SNED1Q8TER0 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC6.6□□□□□ -1.35
SNED1Q8TER0 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC6.6□□□□□ -1.35
SNED1Q8TER0 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.6□□□□□ -1.35
SNED1Q8TER0 AC209154.1-201ENST00000582156 337 ntBASIC6.6□□□□□ -1.35
SNED1Q8TER0 MIR4697-201ENST00000582977 78 ntBASIC6.6□□□□□ -1.35
SNED1Q8TER0 AL513327.3-201ENST00000602618 469 ntBASIC6.6□□□□□ -1.35
SNED1Q8TER0 AC093799.2-201ENST00000610062 578 ntBASIC6.6□□□□□ -1.35
SNED1Q8TER0 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
SNED1Q8TER0 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
SNED1Q8TER0 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SNED1Q8TER0 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SNED1Q8TER0 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SNED1Q8TER0 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SNED1Q8TER0 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.6□□□□□ -1.35
SNED1Q8TER0 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SNED1Q8TER0 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SNED1Q8TER0 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SNED1Q8TER0 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SNED1Q8TER0 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
SNED1Q8TER0 MIPEPP2-201ENST00000422560 1819 ntBASIC6.59□□□□□ -1.35
SNED1Q8TER0 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SNED1Q8TER0 MTHFD2P5-201ENST00000320415 844 ntBASIC6.59□□□□□ -1.35
SNED1Q8TER0 RN7SKP95-201ENST00000362860 303 ntBASIC6.59□□□□□ -1.35
SNED1Q8TER0 AL353625.1-202ENST00000366273 571 ntBASIC6.59□□□□□ -1.35
SNED1Q8TER0 AL451142.1-201ENST00000375867 775 ntBASIC6.59□□□□□ -1.35
SNED1Q8TER0 CHMP1B2P-201ENST00000399581 597 ntBASIC6.59□□□□□ -1.35
SNED1Q8TER0 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC6.59□□□□□ -1.35
SNED1Q8TER0 RNF10P1-201ENST00000418589 369 ntBASIC6.59□□□□□ -1.35
SNED1Q8TER0 CRIP1P1-201ENST00000427567 185 ntBASIC6.59□□□□□ -1.35
SNED1Q8TER0 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC6.59□□□□□ -1.35
SNED1Q8TER0 AC104634.1-201ENST00000452720 462 ntBASIC6.59□□□□□ -1.35
SNED1Q8TER0 RPL5P22-201ENST00000480199 884 ntBASIC6.59□□□□□ -1.35
SNED1Q8TER0 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC6.59□□□□□ -1.35
SNED1Q8TER0 RPS4XP20-201ENST00000505751 772 ntBASIC6.59□□□□□ -1.35
SNED1Q8TER0 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
SNED1Q8TER0 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
SNED1Q8TER0 NPM1P42-201ENST00000560329 862 ntBASIC6.59□□□□□ -1.35
SNED1Q8TER0 MIR4691-201ENST00000583764 85 ntBASIC6.59□□□□□ -1.35
SNED1Q8TER0 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
SNED1Q8TER0 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.59□□□□□ -1.35
SNED1Q8TER0 AP000769.2-201ENST00000602344 396 ntBASIC6.59□□□□□ -1.35
SNED1Q8TER0 AC009237.13-201ENST00000603193 276 ntBASIC6.59□□□□□ -1.35
SNED1Q8TER0 AC005084.1-201ENST00000605160 304 ntBASIC6.59□□□□□ -1.35
SNED1Q8TER0 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SNED1Q8TER0 AC011933.2-201ENST00000578539 2790 ntBASIC6.59□□□□□ -1.35
SNED1Q8TER0 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.59□□□□□ -1.35
SNED1Q8TER0 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms