Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AL391358.1-201ENST00000605342 190 ntBASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 AL031658.2-201ENST00000616850 651 ntBASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 MIR1182-201ENST00000408363 97 ntBASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 C4BPAP2-201ENST00000428434 478 ntBASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 AL672138.1-201ENST00000450604 1015 ntBASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 RSU1P1-201ENST00000453416 441 ntBASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 AC233699.1-201ENST00000569955 1168 ntBASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 RN7SL690P-201ENST00000582087 240 ntBASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 KIAA1217-204ENST00000376454 7381 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 KAT7-201ENST00000259021 9644 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 CA5A-201ENST00000309893 7567 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 RNA5SP332-201ENST00000391063 115 ntBASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 OR5AM1P-201ENST00000532136 1032 ntBASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 AC103792.1-201ENST00000603591 919 ntBASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 CRYBG3-201ENST00000389622 10729 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 U3.3-201ENST00000362986 216 ntBASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 GJA6P-201ENST00000415117 1042 ntBASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 AC112498.1-201ENST00000444401 332 ntBASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 RN7SKP67-201ENST00000515905 235 ntBASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 AC119674.1-213ENST00000641177 1386 ntBASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 CLASP1-203ENST00000409078 8002 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 PRNCR1-201ENST00000635449 12727 ntBASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 RNA5SP455-201ENST00000365190 119 ntBASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 CYP4F29P-201ENST00000420685 446 ntBASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 RPL5P25-201ENST00000441148 775 ntBASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 MIR4715-201ENST00000584117 79 ntBASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 AC009597.2-201ENST00000604659 592 ntBASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 AC005084.1-201ENST00000605160 304 ntBASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 AC245389.2-201ENST00000616023 576 ntBASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 AC242843.1-201ENST00000618702 573 ntBASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 AC092747.4-201ENST00000620519 1861 ntBASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 SDAD1P1-202ENST00000524156 2051 ntBASIC3.63□□□□□ -1.83
ALMS1Q8TCU4 CDC123-202ENST00000378900 933 ntTSL 5 BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 EI24P4-201ENST00000423683 1078 ntBASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 TMEM183AP1-205ENST00000432739 290 ntBASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 TDGF1P1-201ENST00000445734 527 ntBASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 AL596266.1-201ENST00000448132 400 ntBASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms