Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC5.87□□□□□ -1.47
LMO3Q8TAP4 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC5.87□□□□□ -1.47
LMO3Q8TAP4 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.87□□□□□ -1.47
LMO3Q8TAP4 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.87□□□□□ -1.47
LMO3Q8TAP4 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.87□□□□□ -1.47
LMO3Q8TAP4 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.87□□□□□ -1.47
LMO3Q8TAP4 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC5.87□□□□□ -1.47
LMO3Q8TAP4 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC5.87□□□□□ -1.47
LMO3Q8TAP4 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
LMO3Q8TAP4 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC5.87□□□□□ -1.47
LMO3Q8TAP4 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LMO3Q8TAP4 IGBP1P4-201ENST00000503202 879 ntBASIC5.87□□□□□ -1.47
LMO3Q8TAP4 AC109481.1-201ENST00000509173 282 ntBASIC5.87□□□□□ -1.47
LMO3Q8TAP4 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC5.87□□□□□ -1.47
LMO3Q8TAP4 AC078878.1-201ENST00000539832 958 ntBASIC5.87□□□□□ -1.47
LMO3Q8TAP4 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
LMO3Q8TAP4 AC020978.7-201ENST00000575953 1187 ntBASIC5.87□□□□□ -1.47
LMO3Q8TAP4 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.87□□□□□ -1.47
LMO3Q8TAP4 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.87□□□□□ -1.47
LMO3Q8TAP4 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.87□□□□□ -1.47
LMO3Q8TAP4 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.87□□□□□ -1.47
LMO3Q8TAP4 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
LMO3Q8TAP4 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.87□□□□□ -1.47
LMO3Q8TAP4 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.87□□□□□ -1.47
LMO3Q8TAP4 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.87□□□□□ -1.47
LMO3Q8TAP4 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
LMO3Q8TAP4 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LMO3Q8TAP4 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
LMO3Q8TAP4 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
LMO3Q8TAP4 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
LMO3Q8TAP4 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
LMO3Q8TAP4 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LMO3Q8TAP4 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LMO3Q8TAP4 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LMO3Q8TAP4 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.86□□□□□ -1.47
LMO3Q8TAP4 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.86□□□□□ -1.47
LMO3Q8TAP4 AC009135.2-201ENST00000624136 1768 ntBASIC5.86□□□□□ -1.47
LMO3Q8TAP4 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
LMO3Q8TAP4 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LMO3Q8TAP4 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LMO3Q8TAP4 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC5.86□□□□□ -1.47
LMO3Q8TAP4 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LMO3Q8TAP4 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LMO3Q8TAP4 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LMO3Q8TAP4 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.86□□□□□ -1.47
LMO3Q8TAP4 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.86□□□□□ -1.47
LMO3Q8TAP4 TNPO1P1-201ENST00000423641 1138 ntBASIC5.86□□□□□ -1.47
LMO3Q8TAP4 SRSF1P1-201ENST00000424058 520 ntBASIC5.86□□□□□ -1.47
LMO3Q8TAP4 SETP10-201ENST00000424368 814 ntBASIC5.86□□□□□ -1.47
LMO3Q8TAP4 RPL5P2-201ENST00000429598 854 ntBASIC5.86□□□□□ -1.47
LMO3Q8TAP4 AC079807.1-201ENST00000429993 481 ntBASIC5.86□□□□□ -1.47
LMO3Q8TAP4 SUMO2P8-201ENST00000434672 286 ntBASIC5.86□□□□□ -1.47
LMO3Q8TAP4 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC5.86□□□□□ -1.47
LMO3Q8TAP4 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.86□□□□□ -1.47
LMO3Q8TAP4 AC012075.1-201ENST00000436549 580 ntBASIC5.86□□□□□ -1.47
LMO3Q8TAP4 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.86□□□□□ -1.47
LMO3Q8TAP4 AC090804.1-201ENST00000448870 490 ntBASIC5.86□□□□□ -1.47
LMO3Q8TAP4 RPL31P15-201ENST00000449770 338 ntBASIC5.86□□□□□ -1.47
LMO3Q8TAP4 RANP1-206ENST00000455094 651 ntBASIC5.86□□□□□ -1.47
LMO3Q8TAP4 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.86□□□□□ -1.47
LMO3Q8TAP4 PPIAP19-201ENST00000486414 492 ntBASIC5.86□□□□□ -1.47
LMO3Q8TAP4 AC109464.1-201ENST00000511091 819 ntBASIC5.86□□□□□ -1.47
LMO3Q8TAP4 MTND1P36-201ENST00000522384 936 ntBASIC5.86□□□□□ -1.47
LMO3Q8TAP4 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.86□□□□□ -1.47
LMO3Q8TAP4 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
LMO3Q8TAP4 FO393422.1-201ENST00000603908 708 ntBASIC5.86□□□□□ -1.47
LMO3Q8TAP4 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.86□□□□□ -1.47
LMO3Q8TAP4 uc_338.7-201ENST00000621834 124 ntBASIC5.86□□□□□ -1.47
LMO3Q8TAP4 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
LMO3Q8TAP4 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LMO3Q8TAP4 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LMO3Q8TAP4 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.86□□□□□ -1.47
LMO3Q8TAP4 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LMO3Q8TAP4 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LMO3Q8TAP4 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
LMO3Q8TAP4 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.86□□□□□ -1.47
LMO3Q8TAP4 AL353796.1-201ENST00000561542 3241 ntBASIC5.86□□□□□ -1.47
LMO3Q8TAP4 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LMO3Q8TAP4 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC5.85□□□□□ -1.47
LMO3Q8TAP4 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LMO3Q8TAP4 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LMO3Q8TAP4 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LMO3Q8TAP4 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LMO3Q8TAP4 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.85□□□□□ -1.47
LMO3Q8TAP4 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LMO3Q8TAP4 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LMO3Q8TAP4 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
LMO3Q8TAP4 TMSB4XP4-201ENST00000323496 618 ntBASIC5.85□□□□□ -1.47
LMO3Q8TAP4 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LMO3Q8TAP4 RNU4-2-201ENST00000365668 141 ntBASIC5.85□□□□□ -1.47
LMO3Q8TAP4 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LMO3Q8TAP4 OR2AT2P-201ENST00000413438 905 ntBASIC5.85□□□□□ -1.47
LMO3Q8TAP4 AC017019.1-201ENST00000426129 261 ntBASIC5.85□□□□□ -1.47
LMO3Q8TAP4 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.85□□□□□ -1.47
LMO3Q8TAP4 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC5.85□□□□□ -1.47
LMO3Q8TAP4 CYCSP51-201ENST00000443545 318 ntBASIC5.85□□□□□ -1.47
LMO3Q8TAP4 AL161636.2-201ENST00000445179 927 ntBASIC5.85□□□□□ -1.47
LMO3Q8TAP4 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.85□□□□□ -1.47
LMO3Q8TAP4 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
LMO3Q8TAP4 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms