Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC6.17□□□□□ -1.42
CCDC65Q8IXS2 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
CCDC65Q8IXS2 AC007938.2-201ENST00000604666 2634 ntBASIC6.17□□□□□ -1.42
CCDC65Q8IXS2 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC65Q8IXS2 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC65Q8IXS2 AC083899.1-201ENST00000454465 3819 ntBASIC6.17□□□□□ -1.42
CCDC65Q8IXS2 TCP11X1-202ENST00000622971 1372 ntBASIC6.17□□□□□ -1.42
CCDC65Q8IXS2 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC6.16□□□□□ -1.42
CCDC65Q8IXS2 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC65Q8IXS2 AC004158.1-201ENST00000564508 4319 ntBASIC6.16□□□□□ -1.42
CCDC65Q8IXS2 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC65Q8IXS2 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.16□□□□□ -1.42
CCDC65Q8IXS2 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC6.16□□□□□ -1.42
CCDC65Q8IXS2 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC65Q8IXS2 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC6.16□□□□□ -1.42
CCDC65Q8IXS2 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC6.16□□□□□ -1.42
CCDC65Q8IXS2 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC65Q8IXS2 RNA5SP46-201ENST00000362370 120 ntBASIC6.16□□□□□ -1.42
CCDC65Q8IXS2 RN7SKP292-201ENST00000365522 317 ntBASIC6.16□□□□□ -1.42
CCDC65Q8IXS2 RN7SKP81-201ENST00000365603 331 ntBASIC6.16□□□□□ -1.42
CCDC65Q8IXS2 PPCS-201ENST00000372556 984 ntTSL 2 BASIC6.16□□□□□ -1.42
CCDC65Q8IXS2 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CCDC65Q8IXS2 SEPT7P2-202ENST00000398921 823 ntBASIC6.16□□□□□ -1.42
CCDC65Q8IXS2 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.16□□□□□ -1.42
CCDC65Q8IXS2 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC6.16□□□□□ -1.42
CCDC65Q8IXS2 RPL23AP19-201ENST00000436229 369 ntBASIC6.16□□□□□ -1.42
CCDC65Q8IXS2 EEF1B2P6-201ENST00000445713 673 ntBASIC6.16□□□□□ -1.42
CCDC65Q8IXS2 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.16□□□□□ -1.42
CCDC65Q8IXS2 AL358876.1-201ENST00000453364 1075 ntBASIC6.16□□□□□ -1.42
CCDC65Q8IXS2 RN7SL583P-201ENST00000475692 287 ntBASIC6.16□□□□□ -1.42
CCDC65Q8IXS2 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC6.16□□□□□ -1.42
CCDC65Q8IXS2 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC65Q8IXS2 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC6.16□□□□□ -1.42
CCDC65Q8IXS2 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.16□□□□□ -1.42
CCDC65Q8IXS2 AC022826.1-201ENST00000519383 805 ntBASIC6.16□□□□□ -1.42
CCDC65Q8IXS2 TRIM51DP-201ENST00000529746 596 ntBASIC6.16□□□□□ -1.42
CCDC65Q8IXS2 MRPS21P7-201ENST00000566937 238 ntBASIC6.16□□□□□ -1.42
CCDC65Q8IXS2 RBM22P12-201ENST00000567098 1255 ntBASIC6.16□□□□□ -1.42
CCDC65Q8IXS2 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC6.16□□□□□ -1.42
CCDC65Q8IXS2 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC6.16□□□□□ -1.42
CCDC65Q8IXS2 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.16□□□□□ -1.42
CCDC65Q8IXS2 PPATP2-201ENST00000605635 508 ntBASIC6.16□□□□□ -1.42
CCDC65Q8IXS2 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.16□□□□□ -1.42
CCDC65Q8IXS2 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC6.16□□□□□ -1.42
CCDC65Q8IXS2 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC6.16□□□□□ -1.42
CCDC65Q8IXS2 AC008691.1-209ENST00000642094 814 ntBASIC6.16□□□□□ -1.42
CCDC65Q8IXS2 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC6.16□□□□□ -1.42
CCDC65Q8IXS2 AC005005.4-201ENST00000623789 16698 ntBASIC6.16□□□□□ -1.42
CCDC65Q8IXS2 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
CCDC65Q8IXS2 AC079097.1-201ENST00000512187 1399 ntBASIC6.16□□□□□ -1.42
CCDC65Q8IXS2 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.16□□□□□ -1.42
CCDC65Q8IXS2 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
CCDC65Q8IXS2 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC65Q8IXS2 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC65Q8IXS2 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CCDC65Q8IXS2 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
CCDC65Q8IXS2 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC6.15□□□□□ -1.42
CCDC65Q8IXS2 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC65Q8IXS2 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC65Q8IXS2 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.15□□□□□ -1.42
CCDC65Q8IXS2 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC65Q8IXS2 AC019072.1-201ENST00000604535 1551 ntBASIC6.15□□□□□ -1.42
CCDC65Q8IXS2 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC6.15□□□□□ -1.42
CCDC65Q8IXS2 AL162456.1-201ENST00000634535 2006 ntBASIC6.15□□□□□ -1.42
CCDC65Q8IXS2 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC65Q8IXS2 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC6.15□□□□□ -1.42
CCDC65Q8IXS2 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC65Q8IXS2 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC65Q8IXS2 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.15□□□□□ -1.42
CCDC65Q8IXS2 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
CCDC65Q8IXS2 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
CCDC65Q8IXS2 EI24P3-201ENST00000399046 1062 ntBASIC6.15□□□□□ -1.42
CCDC65Q8IXS2 MIR1282-201ENST00000408865 101 ntBASIC6.15□□□□□ -1.42
CCDC65Q8IXS2 RPSAP35-201ENST00000413753 818 ntBASIC6.15□□□□□ -1.42
CCDC65Q8IXS2 AL133173.1-201ENST00000423458 397 ntBASIC6.15□□□□□ -1.42
CCDC65Q8IXS2 SUMO2P3-201ENST00000438311 288 ntBASIC6.15□□□□□ -1.42
CCDC65Q8IXS2 AL359265.1-201ENST00000440296 795 ntBASIC6.15□□□□□ -1.42
CCDC65Q8IXS2 AC073465.2-201ENST00000440938 498 ntBASIC6.15□□□□□ -1.42
CCDC65Q8IXS2 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC6.15□□□□□ -1.42
CCDC65Q8IXS2 VDAC2P4-201ENST00000452925 711 ntBASIC6.15□□□□□ -1.42
CCDC65Q8IXS2 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC65Q8IXS2 LDHBP2-201ENST00000456969 1005 ntBASIC6.15□□□□□ -1.42
CCDC65Q8IXS2 FTH1P11-201ENST00000517577 551 ntBASIC6.15□□□□□ -1.42
CCDC65Q8IXS2 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC65Q8IXS2 AL049872.1-201ENST00000556323 322 ntBASIC6.15□□□□□ -1.42
CCDC65Q8IXS2 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC6.15□□□□□ -1.42
CCDC65Q8IXS2 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.15□□□□□ -1.42
CCDC65Q8IXS2 AC010547.6-201ENST00000571789 193 ntBASIC6.15□□□□□ -1.42
CCDC65Q8IXS2 AC008115.3-201ENST00000614874 549 ntBASIC6.15□□□□□ -1.42
CCDC65Q8IXS2 MIR6133-201ENST00000617057 108 ntBASIC6.15□□□□□ -1.42
CCDC65Q8IXS2 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.15□□□□□ -1.42
CCDC65Q8IXS2 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CCDC65Q8IXS2 AC092451.3-201ENST00000625067 1343 ntBASIC6.15□□□□□ -1.43
CCDC65Q8IXS2 GVINP1-202ENST00000531871 7271 ntBASIC6.15□□□□□ -1.43
CCDC65Q8IXS2 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CCDC65Q8IXS2 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.15□□□□□ -1.43
CCDC65Q8IXS2 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.15□□□□□ -1.43
CCDC65Q8IXS2 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.14□□□□□ -1.43
CCDC65Q8IXS2 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC65Q8IXS2 AL022311.1-201ENST00000623726 19416 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms