Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 OR11H13P-201ENST00000359695 979 ntBASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 RNU1-84P-201ENST00000365447 164 ntBASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 RNU6-932P-201ENST00000391108 106 ntBASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 YWHAZP4-201ENST00000392459 708 ntBASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 AL360013.1-201ENST00000419031 858 ntBASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 NENFP1-201ENST00000419476 466 ntBASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 AC023128.2-201ENST00000420880 1223 ntBASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 AL365203.2-201ENST00000423444 196 ntBASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 AC091390.2-201ENST00000432573 374 ntBASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 PMS2P9-201ENST00000441237 515 ntBASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 CUBNP2-201ENST00000443534 1139 ntBASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 EEF1B2P5-201ENST00000444820 548 ntBASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 CASP3P1-201ENST00000446037 609 ntBASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 GTF2IP12-201ENST00000456547 356 ntBASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 AC068522.1-201ENST00000482895 345 ntBASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 FTH1P8-201ENST00000498161 514 ntBASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 MTND6P8-201ENST00000503471 522 ntBASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 AC010625.1-201ENST00000511296 403 ntBASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 MTND5P13-201ENST00000513046 1079 ntBASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 AC006518.2-201ENST00000542513 940 ntBASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 MT1CP-201ENST00000567054 174 ntBASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 DEFB131E-202ENST00000602581 683 ntBASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 AP002906.1-201ENST00000603405 233 ntBASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 DPRXP5-201ENST00000604662 539 ntBASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 AC018692.2-201ENST00000624130 348 ntBASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 AC092184.1-201ENST00000625042 715 ntBASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 AC073488.9-201ENST00000631601 754 ntBASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
TRIM48Q8IWZ4 AL512310.3-201ENST00000547023 1335 ntBASIC6.4□□□□□ -1.39
TRIM48Q8IWZ4 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.4□□□□□ -1.39
TRIM48Q8IWZ4 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
TRIM48Q8IWZ4 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.39
TRIM48Q8IWZ4 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.4□□□□□ -1.39
TRIM48Q8IWZ4 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
TRIM48Q8IWZ4 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
TRIM48Q8IWZ4 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
TRIM48Q8IWZ4 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
TRIM48Q8IWZ4 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.4□□□□□ -1.39
TRIM48Q8IWZ4 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
TRIM48Q8IWZ4 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 AL669831.5-218ENST00000591702 1873 ntBASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 AC119674.1-202ENST00000641333 1860 ntBASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 SNORD116.1-201ENST00000365628 92 ntBASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 OR13C3-201ENST00000374781 1108 ntBASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 PSMA6P1-201ENST00000400275 741 ntBASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 FABP12P1-201ENST00000401911 322 ntBASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 AC099535.1-201ENST00000408928 371 ntBASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 Y_RNA.619-201ENST00000410951 90 ntBASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms