Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.37□□□□□ -1.39
HERC6Q8IVU3 OR6M2P-201ENST00000529831 871 ntBASIC6.37□□□□□ -1.39
HERC6Q8IVU3 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC6.37□□□□□ -1.39
HERC6Q8IVU3 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.37□□□□□ -1.39
HERC6Q8IVU3 HAUS8P1-201ENST00000549005 542 ntBASIC6.37□□□□□ -1.39
HERC6Q8IVU3 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.37□□□□□ -1.39
HERC6Q8IVU3 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC6.37□□□□□ -1.39
HERC6Q8IVU3 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.37□□□□□ -1.39
HERC6Q8IVU3 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.37□□□□□ -1.39
HERC6Q8IVU3 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC6.37□□□□□ -1.39
HERC6Q8IVU3 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC6.37□□□□□ -1.39
HERC6Q8IVU3 AC119403.2-201ENST00000590960 598 ntBASIC6.37□□□□□ -1.39
HERC6Q8IVU3 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.37□□□□□ -1.39
HERC6Q8IVU3 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.37□□□□□ -1.39
HERC6Q8IVU3 AC024589.2-201ENST00000605642 1294 ntBASIC6.37□□□□□ -1.39
HERC6Q8IVU3 AL512329.2-201ENST00000607350 548 ntBASIC6.37□□□□□ -1.39
HERC6Q8IVU3 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.37□□□□□ -1.39
HERC6Q8IVU3 AC005840.5-201ENST00000619166 599 ntBASIC6.37□□□□□ -1.39
HERC6Q8IVU3 MIR6837-201ENST00000620884 64 ntBASIC6.37□□□□□ -1.39
HERC6Q8IVU3 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.37□□□□□ -1.39
HERC6Q8IVU3 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HERC6Q8IVU3 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HERC6Q8IVU3 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HERC6Q8IVU3 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
HERC6Q8IVU3 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.37□□□□□ -1.39
HERC6Q8IVU3 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
HERC6Q8IVU3 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HERC6Q8IVU3 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HERC6Q8IVU3 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HERC6Q8IVU3 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.36□□□□□ -1.39
HERC6Q8IVU3 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HERC6Q8IVU3 RNU4-39P-201ENST00000362455 127 ntBASIC6.36□□□□□ -1.39
HERC6Q8IVU3 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC6.36□□□□□ -1.39
HERC6Q8IVU3 RPS4XP5-201ENST00000419038 768 ntBASIC6.36□□□□□ -1.39
HERC6Q8IVU3 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.36□□□□□ -1.39
HERC6Q8IVU3 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.36□□□□□ -1.39
HERC6Q8IVU3 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.36□□□□□ -1.39
HERC6Q8IVU3 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC6.36□□□□□ -1.39
HERC6Q8IVU3 RPS15AP29-201ENST00000445539 400 ntBASIC6.36□□□□□ -1.39
HERC6Q8IVU3 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.36□□□□□ -1.39
HERC6Q8IVU3 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.36□□□□□ -1.39
HERC6Q8IVU3 MTND5P8-201ENST00000449817 1083 ntBASIC6.36□□□□□ -1.39
HERC6Q8IVU3 AC105918.1-201ENST00000474399 838 ntBASIC6.36□□□□□ -1.39
HERC6Q8IVU3 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC6.36□□□□□ -1.39
HERC6Q8IVU3 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.36□□□□□ -1.39
HERC6Q8IVU3 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.36□□□□□ -1.39
HERC6Q8IVU3 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.36□□□□□ -1.39
HERC6Q8IVU3 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.36□□□□□ -1.39
HERC6Q8IVU3 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC6.36□□□□□ -1.39
HERC6Q8IVU3 OR51C1P-201ENST00000608504 942 ntBASIC6.36□□□□□ -1.39
HERC6Q8IVU3 AC074276.2-201ENST00000619891 348 ntBASIC6.36□□□□□ -1.39
HERC6Q8IVU3 AL356490.1-201ENST00000623079 479 ntBASIC6.36□□□□□ -1.39
HERC6Q8IVU3 METTL15-211ENST00000634762 718 ntTSL 5 BASIC6.36□□□□□ -1.39
HERC6Q8IVU3 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC6.36□□□□□ -1.39
HERC6Q8IVU3 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.36□□□□□ -1.39
HERC6Q8IVU3 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.36□□□□□ -1.39
HERC6Q8IVU3 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.36□□□□□ -1.39
HERC6Q8IVU3 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.36□□□□□ -1.39
HERC6Q8IVU3 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.36□□□□□ -1.39
HERC6Q8IVU3 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
HERC6Q8IVU3 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HERC6Q8IVU3 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HERC6Q8IVU3 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
HERC6Q8IVU3 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.36□□□□□ -1.39
HERC6Q8IVU3 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HERC6Q8IVU3 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
HERC6Q8IVU3 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.35□□□□□ -1.39
HERC6Q8IVU3 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.35□□□□□ -1.39
HERC6Q8IVU3 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.35□□□□□ -1.39
HERC6Q8IVU3 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HERC6Q8IVU3 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC6.35□□□□□ -1.39
HERC6Q8IVU3 AC009804.1-201ENST00000400949 179 ntBASIC6.35□□□□□ -1.39
HERC6Q8IVU3 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HERC6Q8IVU3 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC6.35□□□□□ -1.39
HERC6Q8IVU3 AL139148.1-201ENST00000427122 680 ntBASIC6.35□□□□□ -1.39
HERC6Q8IVU3 CNOT7P2-201ENST00000441051 832 ntBASIC6.35□□□□□ -1.39
HERC6Q8IVU3 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.35□□□□□ -1.39
HERC6Q8IVU3 AL022237.1-201ENST00000446663 358 ntBASIC6.35□□□□□ -1.39
HERC6Q8IVU3 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC6.35□□□□□ -1.39
HERC6Q8IVU3 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.35□□□□□ -1.39
HERC6Q8IVU3 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC6.35□□□□□ -1.39
HERC6Q8IVU3 AC100832.1-201ENST00000471945 383 ntBASIC6.35□□□□□ -1.39
HERC6Q8IVU3 RWDD4P1-201ENST00000488019 565 ntBASIC6.35□□□□□ -1.39
HERC6Q8IVU3 AC024558.1-201ENST00000505008 528 ntBASIC6.35□□□□□ -1.39
HERC6Q8IVU3 HMGB1P47-201ENST00000511281 589 ntBASIC6.35□□□□□ -1.39
HERC6Q8IVU3 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC6.35□□□□□ -1.39
HERC6Q8IVU3 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.35□□□□□ -1.39
HERC6Q8IVU3 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC6.35□□□□□ -1.39
HERC6Q8IVU3 MRPS16P1-201ENST00000523462 412 ntBASIC6.35□□□□□ -1.39
HERC6Q8IVU3 AP001804.1-201ENST00000526868 919 ntBASIC6.35□□□□□ -1.39
HERC6Q8IVU3 OR4A6P-201ENST00000534364 970 ntBASIC6.35□□□□□ -1.39
HERC6Q8IVU3 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC6.35□□□□□ -1.39
HERC6Q8IVU3 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC6.35□□□□□ -1.39
HERC6Q8IVU3 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC6.35□□□□□ -1.39
HERC6Q8IVU3 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC6.35□□□□□ -1.39
HERC6Q8IVU3 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HERC6Q8IVU3 AC015720.2-201ENST00000567709 334 ntBASIC6.35□□□□□ -1.39
HERC6Q8IVU3 AC092474.3-201ENST00000603022 568 ntBASIC6.35□□□□□ -1.39
HERC6Q8IVU3 AC145423.1-201ENST00000605712 336 ntBASIC6.35□□□□□ -1.39
HERC6Q8IVU3 RNU6-84P-201ENST00000607737 102 ntBASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms