Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 AC002069.2-201ENST00000603580 883 ntBASIC3.8□□□□□ -1.8
SCXQ7RTU7 AL031601.1-201ENST00000605702 394 ntBASIC3.8□□□□□ -1.8
SCXQ7RTU7 RN7SL787P-201ENST00000613000 284 ntBASIC3.8□□□□□ -1.8
SCXQ7RTU7 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SCXQ7RTU7 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SCXQ7RTU7 AC003992.1-201ENST00000635364 557 ntBASIC3.8□□□□□ -1.8
SCXQ7RTU7 AL049767.1-202ENST00000637826 242 ntBASIC3.8□□□□□ -1.8
SCXQ7RTU7 AC114774.1-201ENST00000507410 1770 ntBASIC3.8□□□□□ -1.8
SCXQ7RTU7 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SCXQ7RTU7 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
SCXQ7RTU7 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SCXQ7RTU7 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SCXQ7RTU7 AL161756.3-201ENST00000641216 2071 ntBASIC3.8□□□□□ -1.8
SCXQ7RTU7 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
SCXQ7RTU7 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SCXQ7RTU7 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
SCXQ7RTU7 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
SCXQ7RTU7 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC3.8□□□□□ -1.8
SCXQ7RTU7 SMG1P7-201ENST00000565246 2704 ntBASIC3.79□□□□□ -1.8
SCXQ7RTU7 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SCXQ7RTU7 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
SCXQ7RTU7 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC3.79□□□□□ -1.8
SCXQ7RTU7 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
SCXQ7RTU7 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SCXQ7RTU7 CCNT2P1-201ENST00000423082 1315 ntBASIC3.79□□□□□ -1.8
SCXQ7RTU7 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC3.79□□□□□ -1.8
SCXQ7RTU7 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SCXQ7RTU7 SELENOWP1-201ENST00000322792 252 ntBASIC3.79□□□□□ -1.8
SCXQ7RTU7 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
SCXQ7RTU7 MIR375-201ENST00000362103 64 ntBASIC3.79□□□□□ -1.8
SCXQ7RTU7 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SCXQ7RTU7 PPCS-201ENST00000372556 984 ntTSL 2 BASIC3.79□□□□□ -1.8
SCXQ7RTU7 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
SCXQ7RTU7 TPT1-204ENST00000379060 764 ntTSL 5 BASIC3.79□□□□□ -1.8
SCXQ7RTU7 SNORA5.1-201ENST00000384275 131 ntBASIC3.79□□□□□ -1.8
SCXQ7RTU7 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SCXQ7RTU7 RNU6-1320P-201ENST00000390838 107 ntBASIC3.79□□□□□ -1.8
SCXQ7RTU7 RNU6-1269P-201ENST00000391139 107 ntBASIC3.79□□□□□ -1.8
SCXQ7RTU7 U3.25-201ENST00000391209 220 ntBASIC3.79□□□□□ -1.8
SCXQ7RTU7 DNAJA1P3-201ENST00000399417 1194 ntBASIC3.79□□□□□ -1.8
SCXQ7RTU7 AC233289.1-201ENST00000403700 508 ntBASIC3.79□□□□□ -1.8
SCXQ7RTU7 AC016739.1-201ENST00000405359 345 ntBASIC3.79□□□□□ -1.8
SCXQ7RTU7 SNORA81-201ENST00000408493 178 ntBASIC3.79□□□□□ -1.8
SCXQ7RTU7 LSM5-203ENST00000409782 649 ntTSL 5 BASIC3.79□□□□□ -1.8
SCXQ7RTU7 RPL35AP3-201ENST00000414680 288 ntBASIC3.79□□□□□ -1.8
SCXQ7RTU7 SDHDP6-201ENST00000414693 480 ntBASIC3.79□□□□□ -1.8
SCXQ7RTU7 AL513325.1-201ENST00000417716 1034 ntBASIC3.79□□□□□ -1.8
SCXQ7RTU7 AC015977.1-201ENST00000418887 292 ntBASIC3.79□□□□□ -1.8
SCXQ7RTU7 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC3.79□□□□□ -1.8
SCXQ7RTU7 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC3.79□□□□□ -1.8
SCXQ7RTU7 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SCXQ7RTU7 HNRNPA1P29-201ENST00000426409 879 ntBASIC3.79□□□□□ -1.8
SCXQ7RTU7 BX119904.3-201ENST00000428194 957 ntBASIC3.79□□□□□ -1.8
SCXQ7RTU7 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC3.79□□□□□ -1.8
SCXQ7RTU7 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC3.79□□□□□ -1.8
SCXQ7RTU7 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SCXQ7RTU7 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC3.79□□□□□ -1.8
SCXQ7RTU7 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SCXQ7RTU7 AC023141.9-201ENST00000458734 412 ntBASIC3.79□□□□□ -1.8
SCXQ7RTU7 RNU6-599P-201ENST00000459383 107 ntBASIC3.79□□□□□ -1.8
SCXQ7RTU7 RNU6-1193P-201ENST00000459461 107 ntBASIC3.79□□□□□ -1.8
SCXQ7RTU7 AC104164.1-201ENST00000460282 590 ntBASIC3.79□□□□□ -1.8
SCXQ7RTU7 RPSAP39-201ENST00000467439 883 ntBASIC3.79□□□□□ -1.8
SCXQ7RTU7 AC090602.1-201ENST00000469695 252 ntBASIC3.79□□□□□ -1.8
SCXQ7RTU7 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC3.79□□□□□ -1.8
SCXQ7RTU7 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC3.79□□□□□ -1.8
SCXQ7RTU7 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC3.79□□□□□ -1.8
SCXQ7RTU7 AC008629.2-201ENST00000503783 483 ntBASIC3.79□□□□□ -1.8
SCXQ7RTU7 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC3.79□□□□□ -1.8
SCXQ7RTU7 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC3.79□□□□□ -1.8
SCXQ7RTU7 RN7SKP34-201ENST00000516142 244 ntBASIC3.79□□□□□ -1.8
SCXQ7RTU7 CYCSP22-201ENST00000517555 339 ntBASIC3.79□□□□□ -1.8
SCXQ7RTU7 AC110056.1-201ENST00000525759 911 ntBASIC3.79□□□□□ -1.8
SCXQ7RTU7 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC3.79□□□□□ -1.8
SCXQ7RTU7 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC3.79□□□□□ -1.8
SCXQ7RTU7 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC3.79□□□□□ -1.8
SCXQ7RTU7 TXNP4-201ENST00000575018 310 ntBASIC3.79□□□□□ -1.8
SCXQ7RTU7 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC3.79□□□□□ -1.8
SCXQ7RTU7 SNORD95-201ENST00000579879 68 ntBASIC3.79□□□□□ -1.8
SCXQ7RTU7 AP001496.3-201ENST00000580230 913 ntBASIC3.79□□□□□ -1.8
SCXQ7RTU7 AC020916.2-201ENST00000591242 360 ntBASIC3.79□□□□□ -1.8
SCXQ7RTU7 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC3.79□□□□□ -1.8
SCXQ7RTU7 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC3.79□□□□□ -1.8
SCXQ7RTU7 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC3.79□□□□□ -1.8
SCXQ7RTU7 RNA5SP440-201ENST00000612665 119 ntBASIC3.79□□□□□ -1.8
SCXQ7RTU7 MIR6826-201ENST00000617808 98 ntBASIC3.79□□□□□ -1.8
SCXQ7RTU7 RNU6-368P-201ENST00000620928 107 ntBASIC3.79□□□□□ -1.8
SCXQ7RTU7 RNU6-538P-201ENST00000622329 107 ntBASIC3.79□□□□□ -1.8
SCXQ7RTU7 AC116667.2-201ENST00000641075 823 ntBASIC3.79□□□□□ -1.8
SCXQ7RTU7 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
SCXQ7RTU7 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SCXQ7RTU7 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SCXQ7RTU7 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC3.79□□□□□ -1.8
SCXQ7RTU7 AP000473.2-201ENST00000602659 1537 ntBASIC3.79□□□□□ -1.8
SCXQ7RTU7 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC3.79□□□□□ -1.8
SCXQ7RTU7 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
SCXQ7RTU7 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SCXQ7RTU7 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
SCXQ7RTU7 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC3.78□□□□□ -1.8
SCXQ7RTU7 PCAT14-202ENST00000627127 3935 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms