Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 SNX6P1-201ENST00000601728 1224 ntBASIC5.64□□□□□ -1.51
PTCHD4Q6ZW05 AC022022.2-201ENST00000602989 360 ntBASIC5.64□□□□□ -1.51
PTCHD4Q6ZW05 AL160237.3-201ENST00000604114 1013 ntBASIC5.64□□□□□ -1.51
PTCHD4Q6ZW05 Z95327.3-201ENST00000610385 572 ntBASIC5.64□□□□□ -1.51
PTCHD4Q6ZW05 AC079395.3-201ENST00000615161 484 ntBASIC5.64□□□□□ -1.51
PTCHD4Q6ZW05 AC009039.2-201ENST00000624524 529 ntBASIC5.64□□□□□ -1.51
PTCHD4Q6ZW05 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
PTCHD4Q6ZW05 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
PTCHD4Q6ZW05 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC5.64□□□□□ -1.51
PTCHD4Q6ZW05 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PTCHD4Q6ZW05 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PTCHD4Q6ZW05 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.64□□□□□ -1.51
PTCHD4Q6ZW05 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PTCHD4Q6ZW05 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
PTCHD4Q6ZW05 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
PTCHD4Q6ZW05 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PTCHD4Q6ZW05 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PTCHD4Q6ZW05 SMG1P5-202ENST00000529428 4219 ntBASIC5.64□□□□□ -1.51
PTCHD4Q6ZW05 SMG1P2-201ENST00000566127 4221 ntBASIC5.64□□□□□ -1.51
PTCHD4Q6ZW05 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PTCHD4Q6ZW05 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PTCHD4Q6ZW05 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.64□□□□□ -1.51
PTCHD4Q6ZW05 AC087516.1-201ENST00000561236 2428 ntBASIC5.64□□□□□ -1.51
PTCHD4Q6ZW05 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.64□□□□□ -1.51
PTCHD4Q6ZW05 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.64□□□□□ -1.51
PTCHD4Q6ZW05 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PTCHD4Q6ZW05 AC025470.1-201ENST00000510053 2032 ntBASIC5.64□□□□□ -1.51
PTCHD4Q6ZW05 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 CR788268.1-201ENST00000603931 1809 ntBASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 RNA5SP231-201ENST00000410496 138 ntBASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 HIGD1AP15-201ENST00000416198 280 ntBASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 XKRYP1-201ENST00000423438 492 ntBASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 XKRYP2-201ENST00000432915 492 ntBASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 SOCS5P1-201ENST00000440415 949 ntBASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 MTCO1P53-201ENST00000441633 699 ntBASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 GAPDHP37-201ENST00000442317 968 ntBASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 RPL5P10-201ENST00000445207 894 ntBASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 AL031313.1-201ENST00000448435 256 ntBASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 RN7SL352P-201ENST00000466002 277 ntBASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 RN7SL83P-201ENST00000468131 297 ntBASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 LARP7P4-201ENST00000481075 878 ntBASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 RPL21P47-201ENST00000483696 477 ntBASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 TPT1P3-201ENST00000492841 512 ntBASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 AC010627.1-201ENST00000503819 1294 ntBASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 AC133963.2-201ENST00000513686 578 ntBASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 RFESD-208ENST00000513950 464 ntTSL 5 BASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 RN7SKP253-201ENST00000516424 309 ntBASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 AP001636.2-201ENST00000525517 696 ntBASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 AP000916.1-201ENST00000533869 835 ntBASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 AC023538.1-201ENST00000534576 736 ntBASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 RBM7-208ENST00000545678 867 ntTSL 3 BASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 AL132657.2-201ENST00000564417 358 ntBASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 AC004777.1-201ENST00000624317 287 ntBASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 AC019226.2-201ENST00000625973 424 ntBASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 MTND2P41-201ENST00000637599 773 ntBASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 AC132825.7-201ENST00000638744 335 ntBASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTCHD4Q6ZW05 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.62□□□□□ -1.51
PTCHD4Q6ZW05 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.62□□□□□ -1.51
PTCHD4Q6ZW05 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms