Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC6.43□□□□□ -1.38
GABPAQ06546 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC6.43□□□□□ -1.38
GABPAQ06546 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
GABPAQ06546 HAUS8P1-201ENST00000549005 542 ntBASIC6.43□□□□□ -1.38
GABPAQ06546 AC004825.1-201ENST00000555068 586 ntBASIC6.43□□□□□ -1.38
GABPAQ06546 RPL10P14-201ENST00000565265 298 ntBASIC6.43□□□□□ -1.38
GABPAQ06546 AC105036.1-201ENST00000566222 271 ntBASIC6.43□□□□□ -1.38
GABPAQ06546 AC060766.1-201ENST00000590824 627 ntBASIC6.43□□□□□ -1.38
GABPAQ06546 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.43□□□□□ -1.38
GABPAQ06546 AL139407.1-201ENST00000613826 1175 ntBASIC6.43□□□□□ -1.38
GABPAQ06546 MIR7155-201ENST00000615925 56 ntBASIC6.43□□□□□ -1.38
GABPAQ06546 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.43□□□□□ -1.38
GABPAQ06546 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
GABPAQ06546 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
GABPAQ06546 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
GABPAQ06546 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
GABPAQ06546 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.43□□□□□ -1.38
GABPAQ06546 OR55B1P-203ENST00000641518 2602 ntBASIC6.43□□□□□ -1.38
GABPAQ06546 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
GABPAQ06546 AL137141.1-201ENST00000624622 4836 ntBASIC6.42□□□□□ -1.38
GABPAQ06546 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.42□□□□□ -1.38
GABPAQ06546 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
GABPAQ06546 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6.42□□□□□ -1.38
GABPAQ06546 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
GABPAQ06546 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.42□□□□□ -1.38
GABPAQ06546 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
GABPAQ06546 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
GABPAQ06546 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
GABPAQ06546 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC6.42□□□□□ -1.38
GABPAQ06546 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
GABPAQ06546 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC6.42□□□□□ -1.38
GABPAQ06546 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.42□□□□□ -1.38
GABPAQ06546 GSTM5P1-201ENST00000434751 660 ntBASIC6.42□□□□□ -1.38
GABPAQ06546 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.42□□□□□ -1.38
GABPAQ06546 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC6.42□□□□□ -1.38
GABPAQ06546 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.42□□□□□ -1.38
GABPAQ06546 RPS23P9-201ENST00000448848 438 ntBASIC6.42□□□□□ -1.38
GABPAQ06546 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.42□□□□□ -1.38
GABPAQ06546 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC6.42□□□□□ -1.38
GABPAQ06546 AC021106.1-201ENST00000509020 1058 ntBASIC6.42□□□□□ -1.38
GABPAQ06546 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.42□□□□□ -1.38
GABPAQ06546 RNA5SP373-201ENST00000517271 95 ntBASIC6.42□□□□□ -1.38
GABPAQ06546 HMGB1P40-201ENST00000525121 540 ntBASIC6.42□□□□□ -1.38
GABPAQ06546 OR11J2P-201ENST00000555298 907 ntBASIC6.42□□□□□ -1.38
GABPAQ06546 NMNAT1P5-201ENST00000559657 841 ntBASIC6.42□□□□□ -1.38
GABPAQ06546 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC6.42□□□□□ -1.38
GABPAQ06546 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC6.42□□□□□ -1.38
GABPAQ06546 AC126915.2-201ENST00000610957 190 ntBASIC6.42□□□□□ -1.38
GABPAQ06546 AC090527.3-201ENST00000619041 548 ntBASIC6.42□□□□□ -1.38
GABPAQ06546 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.42□□□□□ -1.38
GABPAQ06546 AL669831.5-218ENST00000591702 1873 ntBASIC6.42□□□□□ -1.38
GABPAQ06546 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.42□□□□□ -1.38
GABPAQ06546 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
GABPAQ06546 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
GABPAQ06546 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
GABPAQ06546 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
GABPAQ06546 ABCA11P-202ENST00000504019 2110 ntBASIC6.41□□□□□ -1.38
GABPAQ06546 AC140479.2-201ENST00000421567 3130 ntBASIC6.41□□□□□ -1.38
GABPAQ06546 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.41□□□□□ -1.38
GABPAQ06546 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC6.41□□□□□ -1.38
GABPAQ06546 MAPK10-270ENST00000641102 3538 ntBASIC6.41□□□□□ -1.38
GABPAQ06546 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
GABPAQ06546 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
GABPAQ06546 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.41□□□□□ -1.38
GABPAQ06546 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
GABPAQ06546 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
GABPAQ06546 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC6.41□□□□□ -1.38
GABPAQ06546 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
GABPAQ06546 RPL12P17-201ENST00000432393 498 ntBASIC6.41□□□□□ -1.38
GABPAQ06546 GAPDHP58-201ENST00000438477 1006 ntBASIC6.41□□□□□ -1.38
GABPAQ06546 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC6.41□□□□□ -1.38
GABPAQ06546 GAPDHP25-201ENST00000447061 1001 ntBASIC6.41□□□□□ -1.38
GABPAQ06546 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC6.41□□□□□ -1.38
GABPAQ06546 RPL32P9-201ENST00000487963 407 ntBASIC6.41□□□□□ -1.38
GABPAQ06546 AC015864.1-201ENST00000496512 544 ntBASIC6.41□□□□□ -1.38
GABPAQ06546 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
GABPAQ06546 OR5M14P-201ENST00000506803 618 ntBASIC6.41□□□□□ -1.38
GABPAQ06546 SCARNA16.4-201ENST00000516956 187 ntBASIC6.41□□□□□ -1.38
GABPAQ06546 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.41□□□□□ -1.38
GABPAQ06546 OR4A46P-201ENST00000527255 933 ntBASIC6.41□□□□□ -1.38
GABPAQ06546 OR10G5P-201ENST00000532733 358 ntBASIC6.41□□□□□ -1.38
GABPAQ06546 AP004607.2-201ENST00000533949 322 ntBASIC6.41□□□□□ -1.38
GABPAQ06546 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC6.41□□□□□ -1.38
GABPAQ06546 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.41□□□□□ -1.38
GABPAQ06546 AC044860.2-201ENST00000561005 179 ntBASIC6.41□□□□□ -1.38
GABPAQ06546 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.41□□□□□ -1.38
GABPAQ06546 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC6.41□□□□□ -1.38
GABPAQ06546 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.41□□□□□ -1.38
GABPAQ06546 AC069307.1-201ENST00000602820 447 ntBASIC6.41□□□□□ -1.38
GABPAQ06546 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
GABPAQ06546 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
GABPAQ06546 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.41□□□□□ -1.38
GABPAQ06546 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
GABPAQ06546 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
GABPAQ06546 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
GABPAQ06546 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
GABPAQ06546 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
GABPAQ06546 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.4□□□□□ -1.38
GABPAQ06546 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.4□□□□□ -1.38
GABPAQ06546 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms