Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC6.11□□□□□ -1.43
TPM4P67936 RPS17P15-201ENST00000475609 349 ntBASIC6.11□□□□□ -1.43
TPM4P67936 RN7SL583P-201ENST00000475692 287 ntBASIC6.11□□□□□ -1.43
TPM4P67936 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TPM4P67936 RPL29P23-201ENST00000486188 442 ntBASIC6.11□□□□□ -1.43
TPM4P67936 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TPM4P67936 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC6.11□□□□□ -1.43
TPM4P67936 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TPM4P67936 HSPE1P2-201ENST00000554777 306 ntBASIC6.11□□□□□ -1.43
TPM4P67936 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
TPM4P67936 MIR3936-201ENST00000584304 110 ntBASIC6.11□□□□□ -1.43
TPM4P67936 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.11□□□□□ -1.43
TPM4P67936 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC6.11□□□□□ -1.43
TPM4P67936 CDC42EP3P1-201ENST00000601004 764 ntBASIC6.11□□□□□ -1.43
TPM4P67936 AC022919.1-201ENST00000624979 626 ntBASIC6.11□□□□□ -1.43
TPM4P67936 AC068870.3-201ENST00000625077 2536 ntBASIC6.11□□□□□ -1.43
TPM4P67936 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC6.11□□□□□ -1.43
TPM4P67936 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TPM4P67936 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TPM4P67936 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
TPM4P67936 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
TPM4P67936 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
TPM4P67936 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC6.11□□□□□ -1.43
TPM4P67936 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
TPM4P67936 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
TPM4P67936 AC093591.2-201ENST00000565254 3843 ntBASIC6.1□□□□□ -1.43
TPM4P67936 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TPM4P67936 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TPM4P67936 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
TPM4P67936 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TPM4P67936 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TPM4P67936 AL034549.2-201ENST00000618285 3373 ntBASIC6.1□□□□□ -1.43
TPM4P67936 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TPM4P67936 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TPM4P67936 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
TPM4P67936 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.1□□□□□ -1.43
TPM4P67936 AC017079.1-201ENST00000333650 415 ntBASIC6.1□□□□□ -1.43
TPM4P67936 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TPM4P67936 RNA5SP500-201ENST00000364486 119 ntBASIC6.1□□□□□ -1.43
TPM4P67936 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.1□□□□□ -1.43
TPM4P67936 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.1□□□□□ -1.43
TPM4P67936 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC6.1□□□□□ -1.43
TPM4P67936 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC6.1□□□□□ -1.43
TPM4P67936 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC6.1□□□□□ -1.43
TPM4P67936 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC6.1□□□□□ -1.43
TPM4P67936 AC087672.1-201ENST00000479876 766 ntBASIC6.1□□□□□ -1.43
TPM4P67936 AC022133.1-201ENST00000490961 571 ntBASIC6.1□□□□□ -1.43
TPM4P67936 RN7SL193P-201ENST00000491708 276 ntBASIC6.1□□□□□ -1.43
TPM4P67936 GOLGA5P1-201ENST00000507317 980 ntBASIC6.1□□□□□ -1.43
TPM4P67936 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.1□□□□□ -1.43
TPM4P67936 EIF3KP3-201ENST00000514461 639 ntBASIC6.1□□□□□ -1.43
TPM4P67936 SCARNA20.4-201ENST00000516969 131 ntBASIC6.1□□□□□ -1.43
TPM4P67936 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.1□□□□□ -1.43
TPM4P67936 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.1□□□□□ -1.43
TPM4P67936 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC6.1□□□□□ -1.43
TPM4P67936 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.1□□□□□ -1.43
TPM4P67936 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.1□□□□□ -1.43
TPM4P67936 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.1□□□□□ -1.43
TPM4P67936 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.1□□□□□ -1.43
TPM4P67936 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.1□□□□□ -1.43
TPM4P67936 AC063977.5-201ENST00000601044 974 ntBASIC6.1□□□□□ -1.43
TPM4P67936 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC6.1□□□□□ -1.43
TPM4P67936 5S_rRNA.29-201ENST00000641250 107 ntBASIC6.1□□□□□ -1.43
TPM4P67936 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
TPM4P67936 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TPM4P67936 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.1□□□□□ -1.43
TPM4P67936 AC003973.3-201ENST00000624863 2822 ntBASIC6.1□□□□□ -1.43
TPM4P67936 AC079298.1-201ENST00000625026 1619 ntBASIC6.1□□□□□ -1.43
TPM4P67936 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC6.1□□□□□ -1.43
TPM4P67936 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.1□□□□□ -1.43
TPM4P67936 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.09□□□□□ -1.43
TPM4P67936 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
TPM4P67936 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
TPM4P67936 ADAM5-202ENST00000399789 1942 ntBASIC6.09□□□□□ -1.43
TPM4P67936 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC6.09□□□□□ -1.43
TPM4P67936 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.09□□□□□ -1.43
TPM4P67936 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
TPM4P67936 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.09□□□□□ -1.43
TPM4P67936 COX5BP7-201ENST00000414780 274 ntBASIC6.09□□□□□ -1.43
TPM4P67936 AC007161.1-204ENST00000423039 460 ntBASIC6.09□□□□□ -1.43
TPM4P67936 AKR1B10P1-201ENST00000425765 942 ntBASIC6.09□□□□□ -1.43
TPM4P67936 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC6.09□□□□□ -1.43
TPM4P67936 AC006335.2-201ENST00000437993 330 ntBASIC6.09□□□□□ -1.43
TPM4P67936 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.09□□□□□ -1.43
TPM4P67936 PRPF38AP1-201ENST00000451976 933 ntBASIC6.09□□□□□ -1.43
TPM4P67936 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC6.09□□□□□ -1.43
TPM4P67936 RPS12P31-201ENST00000491419 398 ntBASIC6.09□□□□□ -1.43
TPM4P67936 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC6.09□□□□□ -1.43
TPM4P67936 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC6.09□□□□□ -1.43
TPM4P67936 IMPA1P1-201ENST00000510718 842 ntBASIC6.09□□□□□ -1.43
TPM4P67936 RNU2-45P-201ENST00000516068 187 ntBASIC6.09□□□□□ -1.43
TPM4P67936 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC6.09□□□□□ -1.43
TPM4P67936 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC6.09□□□□□ -1.43
TPM4P67936 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
TPM4P67936 CLMN-206ENST00000556441 452 ntTSL 5 BASIC6.09□□□□□ -1.43
TPM4P67936 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.09□□□□□ -1.43
TPM4P67936 AP005262.1-201ENST00000582646 997 ntBASIC6.09□□□□□ -1.43
TPM4P67936 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.09□□□□□ -1.43
TPM4P67936 AC139792.1-201ENST00000607051 647 ntBASIC6.09□□□□□ -1.43
TPM4P67936 Z95327.3-201ENST00000610385 572 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms