Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.62□□□□□ -1.51
RPS3AP61247 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC5.62□□□□□ -1.51
RPS3AP61247 HIGD1AP16-201ENST00000450986 258 ntBASIC5.62□□□□□ -1.51
RPS3AP61247 OR52E7P-201ENST00000452394 933 ntBASIC5.62□□□□□ -1.51
RPS3AP61247 AL133351.3-201ENST00000454998 193 ntBASIC5.62□□□□□ -1.51
RPS3AP61247 AC104339.1-201ENST00000465478 348 ntBASIC5.62□□□□□ -1.51
RPS3AP61247 RN7SL170P-201ENST00000487098 295 ntBASIC5.62□□□□□ -1.51
RPS3AP61247 AC090958.1-201ENST00000511122 351 ntBASIC5.62□□□□□ -1.51
RPS3AP61247 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.62□□□□□ -1.51
RPS3AP61247 OR8Q1P-201ENST00000526467 655 ntBASIC5.62□□□□□ -1.51
RPS3AP61247 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.62□□□□□ -1.51
RPS3AP61247 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.62□□□□□ -1.51
RPS3AP61247 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC5.62□□□□□ -1.51
RPS3AP61247 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.62□□□□□ -1.51
RPS3AP61247 LSM3P2-201ENST00000551246 273 ntBASIC5.62□□□□□ -1.51
RPS3AP61247 AC021483.2-201ENST00000567415 758 ntBASIC5.62□□□□□ -1.51
RPS3AP61247 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.62□□□□□ -1.51
RPS3AP61247 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.62□□□□□ -1.51
RPS3AP61247 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.62□□□□□ -1.51
RPS3AP61247 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.62□□□□□ -1.51
RPS3AP61247 DYNLL1P1-201ENST00000595442 269 ntBASIC5.62□□□□□ -1.51
RPS3AP61247 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.62□□□□□ -1.51
RPS3AP61247 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.62□□□□□ -1.51
RPS3AP61247 FAM27E2-201ENST00000619668 403 ntBASIC5.62□□□□□ -1.51
RPS3AP61247 FO681491.1-202ENST00000623392 737 ntBASIC5.62□□□□□ -1.51
RPS3AP61247 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
RPS3AP61247 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
RPS3AP61247 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
RPS3AP61247 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.62□□□□□ -1.51
RPS3AP61247 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
RPS3AP61247 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.62□□□□□ -1.51
RPS3AP61247 MTCO1P7-201ENST00000419523 1542 ntBASIC5.62□□□□□ -1.51
RPS3AP61247 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
RPS3AP61247 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
RPS3AP61247 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RPS3AP61247 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RPS3AP61247 AL034546.1-201ENST00000623740 3693 ntBASIC5.62□□□□□ -1.51
RPS3AP61247 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RPS3AP61247 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
RPS3AP61247 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RPS3AP61247 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RPS3AP61247 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
RPS3AP61247 RAD1P1-201ENST00000231383 813 ntBASIC5.61□□□□□ -1.51
RPS3AP61247 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
RPS3AP61247 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RPS3AP61247 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RPS3AP61247 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RPS3AP61247 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RPS3AP61247 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.61□□□□□ -1.51
RPS3AP61247 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RPS3AP61247 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
RPS3AP61247 MIR433-201ENST00000384837 93 ntBASIC5.61□□□□□ -1.51
RPS3AP61247 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RPS3AP61247 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.61□□□□□ -1.51
RPS3AP61247 AC079809.1-201ENST00000415468 276 ntBASIC5.61□□□□□ -1.51
RPS3AP61247 CCNT2P1-201ENST00000423082 1315 ntBASIC5.61□□□□□ -1.51
RPS3AP61247 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.61□□□□□ -1.51
RPS3AP61247 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.61□□□□□ -1.51
RPS3AP61247 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.61□□□□□ -1.51
RPS3AP61247 MTCYBP12-201ENST00000440559 1134 ntBASIC5.61□□□□□ -1.51
RPS3AP61247 RPL6P30-201ENST00000443382 862 ntBASIC5.61□□□□□ -1.51
RPS3AP61247 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.61□□□□□ -1.51
RPS3AP61247 AC112187.1-201ENST00000455837 479 ntBASIC5.61□□□□□ -1.51
RPS3AP61247 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.61□□□□□ -1.51
RPS3AP61247 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RPS3AP61247 HMGN1P17-201ENST00000513734 295 ntBASIC5.61□□□□□ -1.51
RPS3AP61247 HSD3BP3-201ENST00000514706 994 ntBASIC5.61□□□□□ -1.51
RPS3AP61247 RNA5SP473-201ENST00000516402 125 ntBASIC5.61□□□□□ -1.51
RPS3AP61247 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.61□□□□□ -1.51
RPS3AP61247 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.61□□□□□ -1.51
RPS3AP61247 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.61□□□□□ -1.51
RPS3AP61247 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
RPS3AP61247 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC5.61□□□□□ -1.51
RPS3AP61247 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.61□□□□□ -1.51
RPS3AP61247 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.61□□□□□ -1.51
RPS3AP61247 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.61□□□□□ -1.51
RPS3AP61247 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.61□□□□□ -1.51
RPS3AP61247 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.61□□□□□ -1.51
RPS3AP61247 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC5.61□□□□□ -1.51
RPS3AP61247 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.61□□□□□ -1.51
RPS3AP61247 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.61□□□□□ -1.51
RPS3AP61247 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC5.61□□□□□ -1.51
RPS3AP61247 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.61□□□□□ -1.51
RPS3AP61247 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.61□□□□□ -1.51
RPS3AP61247 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.61□□□□□ -1.51
RPS3AP61247 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.61□□□□□ -1.51
RPS3AP61247 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.61□□□□□ -1.51
RPS3AP61247 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
RPS3AP61247 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.61□□□□□ -1.51
RPS3AP61247 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.61□□□□□ -1.51
RPS3AP61247 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.61□□□□□ -1.51
RPS3AP61247 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.61□□□□□ -1.51
RPS3AP61247 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RPS3AP61247 AC003992.1-201ENST00000635364 557 ntBASIC5.61□□□□□ -1.51
RPS3AP61247 AC079776.5-201ENST00000641920 211 ntBASIC5.61□□□□□ -1.51
RPS3AP61247 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RPS3AP61247 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
RPS3AP61247 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
RPS3AP61247 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RPS3AP61247 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 159.9 ms