Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 RN7SKP124-201ENST00000364730 341 ntBASIC5.06□□□□□ -1.6
CLDN18P56856 RPL11P3-201ENST00000395256 523 ntBASIC5.06□□□□□ -1.6
CLDN18P56856 OR3A2-201ENST00000408891 1076 ntBASIC5.06□□□□□ -1.6
CLDN18P56856 RN7SKP229-201ENST00000410465 302 ntBASIC5.06□□□□□ -1.6
CLDN18P56856 RN7SKP279-201ENST00000411383 298 ntBASIC5.06□□□□□ -1.6
CLDN18P56856 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.06□□□□□ -1.6
CLDN18P56856 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.06□□□□□ -1.6
CLDN18P56856 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.06□□□□□ -1.6
CLDN18P56856 RPL12P18-201ENST00000437175 325 ntBASIC5.06□□□□□ -1.6
CLDN18P56856 AL390119.1-201ENST00000440329 312 ntBASIC5.06□□□□□ -1.6
CLDN18P56856 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.06□□□□□ -1.6
CLDN18P56856 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.06□□□□□ -1.6
CLDN18P56856 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.06□□□□□ -1.6
CLDN18P56856 VN1R96P-201ENST00000446052 858 ntBASIC5.06□□□□□ -1.6
CLDN18P56856 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.06□□□□□ -1.6
CLDN18P56856 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.06□□□□□ -1.6
CLDN18P56856 RPL12P39-201ENST00000455456 496 ntBASIC5.06□□□□□ -1.6
CLDN18P56856 AC093719.1-201ENST00000480427 441 ntBASIC5.06□□□□□ -1.6
CLDN18P56856 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.06□□□□□ -1.6
CLDN18P56856 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.06□□□□□ -1.6
CLDN18P56856 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.06□□□□□ -1.6
CLDN18P56856 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.06□□□□□ -1.6
CLDN18P56856 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.06□□□□□ -1.6
CLDN18P56856 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.06□□□□□ -1.6
CLDN18P56856 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.06□□□□□ -1.6
CLDN18P56856 MIR4311-201ENST00000580794 100 ntBASIC5.06□□□□□ -1.6
CLDN18P56856 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.06□□□□□ -1.6
CLDN18P56856 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.06□□□□□ -1.6
CLDN18P56856 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.06□□□□□ -1.6
CLDN18P56856 AC109309.2-201ENST00000612597 332 ntBASIC5.06□□□□□ -1.6
CLDN18P56856 AC022467.1-201ENST00000614738 749 ntBASIC5.06□□□□□ -1.6
CLDN18P56856 AC015660.5-201ENST00000623238 564 ntBASIC5.06□□□□□ -1.6
CLDN18P56856 AC099654.6-201ENST00000636487 512 ntBASIC5.06□□□□□ -1.6
CLDN18P56856 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CLDN18P56856 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CLDN18P56856 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CLDN18P56856 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CLDN18P56856 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
CLDN18P56856 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CLDN18P56856 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CLDN18P56856 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.06□□□□□ -1.6
CLDN18P56856 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CLDN18P56856 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CLDN18P56856 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.06□□□□□ -1.6
CLDN18P56856 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CLDN18P56856 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CLDN18P56856 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
CLDN18P56856 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.05□□□□□ -1.6
CLDN18P56856 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN18P56856 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN18P56856 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.05□□□□□ -1.6
CLDN18P56856 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.05□□□□□ -1.6
CLDN18P56856 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN18P56856 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.05□□□□□ -1.6
CLDN18P56856 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
CLDN18P56856 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.05□□□□□ -1.6
CLDN18P56856 AL589994.1-201ENST00000404962 340 ntBASIC5.05□□□□□ -1.6
CLDN18P56856 SNORA81-201ENST00000408493 178 ntBASIC5.05□□□□□ -1.6
CLDN18P56856 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.05□□□□□ -1.6
CLDN18P56856 RNGTTP1-201ENST00000420965 728 ntBASIC5.05□□□□□ -1.6
CLDN18P56856 AC092651.1-201ENST00000426110 312 ntBASIC5.05□□□□□ -1.6
CLDN18P56856 AC012075.1-201ENST00000436549 580 ntBASIC5.05□□□□□ -1.6
CLDN18P56856 ARAFP2-201ENST00000440565 559 ntBASIC5.05□□□□□ -1.6
CLDN18P56856 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.05□□□□□ -1.6
CLDN18P56856 VDAC2P4-201ENST00000452925 711 ntBASIC5.05□□□□□ -1.6
CLDN18P56856 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.05□□□□□ -1.6
CLDN18P56856 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN18P56856 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN18P56856 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.05□□□□□ -1.6
CLDN18P56856 RN7SL284P-201ENST00000498823 275 ntBASIC5.05□□□□□ -1.6
CLDN18P56856 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.05□□□□□ -1.6
CLDN18P56856 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN18P56856 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.05□□□□□ -1.6
CLDN18P56856 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CLDN18P56856 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
CLDN18P56856 NPM1P42-201ENST00000560329 862 ntBASIC5.05□□□□□ -1.6
CLDN18P56856 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.05□□□□□ -1.6
CLDN18P56856 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.05□□□□□ -1.6
CLDN18P56856 DHFRP1-201ENST00000579682 559 ntBASIC5.05□□□□□ -1.6
CLDN18P56856 MIR3176-201ENST00000582210 90 ntBASIC5.05□□□□□ -1.6
CLDN18P56856 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.05□□□□□ -1.6
CLDN18P56856 QTRT1P1-201ENST00000604344 1078 ntBASIC5.05□□□□□ -1.6
CLDN18P56856 AP000894.4-201ENST00000610185 483 ntBASIC5.05□□□□□ -1.6
CLDN18P56856 Z95327.3-201ENST00000610385 572 ntBASIC5.05□□□□□ -1.6
CLDN18P56856 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN18P56856 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.05□□□□□ -1.6
CLDN18P56856 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
CLDN18P56856 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN18P56856 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.05□□□□□ -1.6
CLDN18P56856 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.05□□□□□ -1.6
CLDN18P56856 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.05□□□□□ -1.6
CLDN18P56856 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN18P56856 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.05□□□□□ -1.6
CLDN18P56856 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.05□□□□□ -1.6
CLDN18P56856 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN18P56856 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CLDN18P56856 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.05□□□□□ -1.6
CLDN18P56856 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.05□□□□□ -1.6
CLDN18P56856 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
CLDN18P56856 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms