Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 AC138409.2-202ENST00000507274 458 ntBASIC4.08□□□□□ -1.76
FOXA3P55318 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC4.08□□□□□ -1.76
FOXA3P55318 HMGN1P17-201ENST00000513734 295 ntBASIC4.08□□□□□ -1.76
FOXA3P55318 RFPL4AP5-201ENST00000514977 504 ntBASIC4.08□□□□□ -1.76
FOXA3P55318 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC4.08□□□□□ -1.76
FOXA3P55318 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC4.08□□□□□ -1.76
FOXA3P55318 AP000620.1-201ENST00000527147 504 ntBASIC4.08□□□□□ -1.76
FOXA3P55318 AC084121.1-201ENST00000533882 835 ntBASIC4.08□□□□□ -1.76
FOXA3P55318 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC4.08□□□□□ -1.76
FOXA3P55318 SETP1-201ENST00000556014 845 ntBASIC4.08□□□□□ -1.76
FOXA3P55318 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
FOXA3P55318 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.08□□□□□ -1.76
FOXA3P55318 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC4.08□□□□□ -1.76
FOXA3P55318 AP005119.1-201ENST00000580956 292 ntBASIC4.08□□□□□ -1.76
FOXA3P55318 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
FOXA3P55318 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC4.08□□□□□ -1.76
FOXA3P55318 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.08□□□□□ -1.76
FOXA3P55318 AC092681.3-201ENST00000609463 678 ntBASIC4.08□□□□□ -1.76
FOXA3P55318 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC4.08□□□□□ -1.76
FOXA3P55318 MIR6829-201ENST00000620375 67 ntBASIC4.08□□□□□ -1.76
FOXA3P55318 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.08□□□□□ -1.76
FOXA3P55318 AP000648.2-201ENST00000624182 404 ntBASIC4.08□□□□□ -1.76
FOXA3P55318 AP001642.1-201ENST00000624727 2117 ntBASIC4.08□□□□□ -1.76
FOXA3P55318 AC079298.1-201ENST00000625026 1619 ntBASIC4.08□□□□□ -1.76
FOXA3P55318 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.08□□□□□ -1.76
FOXA3P55318 AC073869.10-201ENST00000642016 354 ntBASIC4.08□□□□□ -1.76
FOXA3P55318 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
FOXA3P55318 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
FOXA3P55318 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
FOXA3P55318 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
FOXA3P55318 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
FOXA3P55318 SMG1P7-201ENST00000565246 2704 ntBASIC4.08□□□□□ -1.76
FOXA3P55318 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC4.07□□□□□ -1.76
FOXA3P55318 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.07□□□□□ -1.76
FOXA3P55318 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
FOXA3P55318 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
FOXA3P55318 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
FOXA3P55318 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
FOXA3P55318 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
FOXA3P55318 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
FOXA3P55318 BTBD10P1-201ENST00000549824 1352 ntBASIC4.07□□□□□ -1.76
FOXA3P55318 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
FOXA3P55318 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
FOXA3P55318 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
FOXA3P55318 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
FOXA3P55318 SNORA64.3-201ENST00000365647 134 ntBASIC4.07□□□□□ -1.76
FOXA3P55318 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC4.07□□□□□ -1.76
FOXA3P55318 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
FOXA3P55318 AL359643.1-201ENST00000404109 423 ntBASIC4.07□□□□□ -1.76
FOXA3P55318 RNU2-22P-201ENST00000411266 212 ntBASIC4.07□□□□□ -1.76
FOXA3P55318 MRPL53P1-201ENST00000414323 319 ntBASIC4.07□□□□□ -1.76
FOXA3P55318 NENFP1-201ENST00000419476 466 ntBASIC4.07□□□□□ -1.76
FOXA3P55318 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC4.07□□□□□ -1.76
FOXA3P55318 PRUNEP1-201ENST00000425846 705 ntBASIC4.07□□□□□ -1.76
FOXA3P55318 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC4.07□□□□□ -1.76
FOXA3P55318 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
FOXA3P55318 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC4.07□□□□□ -1.76
FOXA3P55318 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC4.07□□□□□ -1.76
FOXA3P55318 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.07□□□□□ -1.76
FOXA3P55318 RBMY2HP-201ENST00000457961 720 ntBASIC4.07□□□□□ -1.76
FOXA3P55318 RNA5SP103-201ENST00000459503 118 ntBASIC4.07□□□□□ -1.76
FOXA3P55318 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.07□□□□□ -1.76
FOXA3P55318 H3F3AP5-201ENST00000475267 429 ntBASIC4.07□□□□□ -1.76
FOXA3P55318 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC4.07□□□□□ -1.76
FOXA3P55318 RPS17P15-201ENST00000475609 349 ntBASIC4.07□□□□□ -1.76
FOXA3P55318 AC093890.1-201ENST00000502554 540 ntBASIC4.07□□□□□ -1.76
FOXA3P55318 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
FOXA3P55318 DUTP7-201ENST00000507982 486 ntBASIC4.07□□□□□ -1.76
FOXA3P55318 AC134698.1-201ENST00000511619 643 ntBASIC4.07□□□□□ -1.76
FOXA3P55318 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC4.07□□□□□ -1.76
FOXA3P55318 AC021678.3-201ENST00000517893 476 ntBASIC4.07□□□□□ -1.76
FOXA3P55318 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.07□□□□□ -1.76
FOXA3P55318 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC4.07□□□□□ -1.76
FOXA3P55318 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC4.07□□□□□ -1.76
FOXA3P55318 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
FOXA3P55318 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.07□□□□□ -1.76
FOXA3P55318 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC4.07□□□□□ -1.76
FOXA3P55318 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC4.07□□□□□ -1.76
FOXA3P55318 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC4.07□□□□□ -1.76
FOXA3P55318 AC007346.1-201ENST00000569208 867 ntBASIC4.07□□□□□ -1.76
FOXA3P55318 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.07□□□□□ -1.76
FOXA3P55318 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC4.07□□□□□ -1.76
FOXA3P55318 AC068768.2-201ENST00000602352 343 ntBASIC4.07□□□□□ -1.76
FOXA3P55318 BX005214.3-202ENST00000619809 325 ntBASIC4.07□□□□□ -1.76
FOXA3P55318 MIR6839-201ENST00000620425 113 ntBASIC4.07□□□□□ -1.76
FOXA3P55318 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC4.07□□□□□ -1.76
FOXA3P55318 TMEM30CP-203ENST00000637814 1035 ntBASIC4.07□□□□□ -1.76
FOXA3P55318 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC4.07□□□□□ -1.76
FOXA3P55318 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
FOXA3P55318 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.07□□□□□ -1.76
FOXA3P55318 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC4.07□□□□□ -1.76
FOXA3P55318 AL672167.1-204ENST00000641875 3017 ntBASIC4.07□□□□□ -1.76
FOXA3P55318 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
FOXA3P55318 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
FOXA3P55318 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
FOXA3P55318 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
FOXA3P55318 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.07□□□□□ -1.76
FOXA3P55318 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.07□□□□□ -1.76
FOXA3P55318 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
FOXA3P55318 AC008627.1-201ENST00000517511 1704 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 135.2 ms